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Structural Changes in the O-Decay Accelerated Mutants of pharaonis Phoborhodopsin 査読

Yuki Sudo, Yuji Furutani, Masayuki Iwamoto, Naoki Kamo, Hideki Kandori

Biochemistry 47 ( 9 ) 2866 - 2874 2008年2月

Structural analysis of the phototactic transducer protein HtrII linker region from Natronomonas pharaonis 査読

Kokoro Hayashi, Yuki Sudo, JunGoo Jee, Masaki Mishima, Hideyuki Hara, Naoki Kamo, Chojiro Kojima

Biochemistry 46 ( 50 ) 14380 - 14390 2007年12月

Early photocycle structural changes in a bacteriorhodopsin mutant engineered to transmit photosensory signals 査読

Yuki Sudo, Yuji Furutani, John L. Spudich, Hideki Kandori

Journal of Biological Chemistry 282 ( 21 ) 15550 - 15558 2007年5月

担当区分：筆頭著者記述言語：英語掲載種別：研究論文（学術雑誌）出版者・発行元：American Society for Biochemistry and Molecular Biology Inc. (ASBMB)

DOI： 10.1074/jbc.M701271200

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その他リンク： http://orcid.org/0000-0001-5284-8773

Interaction of the halobacterial transducer to a halorhodopsin mutant engineered so as to bind the transducer: Cl- circulation within the extracellular channel 査読

Chisa Hasegawa, Takashi Kikukawa, Seiji Miyauchi, Akiteru Seki, Yuki Sudo, Megumi Kubo, Makoto Demura, Naoki Kamo

Photochemistry and Photobiology 83 ( 2 ) 293 - 302 2007年3月

Participation of the surface structure of Pharaonis phoborhodopsin, ppR and its A149S and A149V mutants, consisting of the C-terminal α-helix and E-F loop, in the complex-formation with the cognate transducer pHtrII, as revealed by site-directed 13C solid-state NMR 査読

Izuru Kawamura, Yoichi Ikeda, Yuki Sudo, Masayuki Iwamoto, Kazumi Shimono, Satoru Yamaguchi, Satoru Tuzi, Hazime Saitô, Naoki Kamo, Akira Naito

Photochemistry and Photobiology 83 ( 2 ) 339 - 345 2007年3月

Functional importance of the interhelical hydrogen bond between Thr 204 and Tyr174 of sensory rhodopsin II and its alteration during the signaling process 査読

Yuki Sudo, Yuji Furutani, Hideki Kandori, John L. Spudich

Journal of Biological Chemistry 281 ( 45 ) 34239 - 34245 2006年11月

担当区分：筆頭著者記述言語：英語掲載種別：研究論文（学術雑誌）出版者・発行元：American Society for Biochemistry and Molecular Biology Inc. (ASBMB)

DOI： 10.1074/jbc.M605907200

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PubMed

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その他リンク： http://orcid.org/0000-0001-5284-8773

Assignment of the hydrogen-out-of-plane and -in-plane vibrations of the retinal chromophore in the K intermediate of pharaonis phoborhodopsin 査読

Yuji Furutani, Yuki Sudo, Akimori Wada, Masayoshi Ito, Kazumi Shimono, Naoki Kamo, Hideki Kandori

Biochemistry 45 ( 39 ) 11836 - 11843 2006年10月

Temperature-dependent interactions between photoactivated Pharaonis phoborhodopsin and its transducer 査読

Kentaro Kamada, Yuji Furutani, Yuki Sudo, Naoki Kamo, Hideki Kandori

Biochemistry 45 ( 15 ) 4859 - 4866 2006年4月

Importance of specific hydrogen bonds of archaeal rhodopsins for the binding to the transducer protein 査読

Yuki Sudo, Masaki Yamabi, Shinnosuke Kato, Chisa Hasegawa, Masayuki Iwamoto, Kazumi Shimono, Naoki Kamo

Journal of Molecular Biology 357 ( 4 ) 1274 - 1282 2006年4月

Three strategically placed hydrogen-bonding residues convert a proton pump into a sensory receptor 査読

Sudo, Y., Spudich, J.L.

Proceedings of the National Academy of Sciences of the United States of America 103 ( 44 ) 16129 - 16134 2006年

Steric constraint in the primary photoproduct of an archaeal rhodopsin from regiospecific perturbation of C-D stretching vibration of the retinyl chromophore 査読

Yuki Sudo, Yuji Furutani, Akimori Wada, Masayoshi Ito, Naoki Kamo, Hideki Kandori

Journal of the American Chemical Society 127 ( 46 ) 16036 - 16037 2005年11月

Linker region of a halobacterial transducer protein interacts directly with its sensor retinal protein 査読

Yuki Sudo, Hideyasu Okuda, Masaki Yamabi, Yuta Fukuzaki, Masaki Mishima, Naoki Kamo, Chojiro Kojima

Biochemistry 44 ( 16 ) 6144 - 6152 2005年4月

Structural changes of the complex between pharaonis phoborhodopsin and its cognate transducer upon formation of the M photointermediate 査読

Yuji Furutani, Kentaro Kamada, Yuki Sudo, Kazumi Shimono, Naoki Kamo, Hideki Kandori

Biochemistry 44 ( 8 ) 2909 - 2915 2005年3月

Correlation of the O-intermediate rate with the pKa of Asp-75 in the dark, the counterion of the Schiff base of pharaonis phoborhodopsin (sensory rhodopsin II) 査読

Masayuki Iwamoto, Yuki Sudo, Kazumi Shimono, Tsunehisa Araiso, Naoki Kamo

Biophysical Journal 88 ( 2 ) 1215 - 1223 2005年

Role of charged residues of pharaonis phoborhodopsin (sensory rhodopsin II) in its interaction with the transducer protein 査読

Yuki Sudo, Masayuki Iwamoto, Kazumi Shimono, Naoki Kamo

Biochemistry 43 ( 43 ) 13748 - 13754 2004年11月

Transient movement of helix F revealed by photo-induced inactivation by reaction of a bulky SH-reagent to cysteine-introduced pharaonis phoborhodopsin (sensory rhodopsin II) 査読

Hideaki Yoshida, Yuki Sudo, Kazumi Shimono, Masayuki Iwamoto, Naoki Kamo

Photochemical and Photobiological Sciences 3 ( 6 ) 537 - 542 2004年6月

Proton Release and Uptake of pharaonis Phoborhodopsin (Sensory Rhodopsin II) Reconstituted into Phospholipids 査読

Masayuki Iwamoto, Chisa Hasegawa, Yuki Sudo, Kazumi Shimono, Tsunehisa Araiso, Naoki Kamo

Biochemistry 43 ( 11 ) 3195 - 3203 2004年3月

Role of Arg-72 of pharaonis Phoborhodopsin (Sensory Rhodopsin II) on its Photochemistry 査読

Yukako Ikeura, Kazumi Shimono, Masayuki Iwamoto, Yuki Sudo, Naoki Kamo

Biophysical Journal 86 ( 5 ) 3112 - 3120 2004年

Conformation and Dynamics of the [3-13C]Ala,[1- 13C]Val-Labeled Truncated pharaonis Transducer, pHtrll(1-159), as Revealed by Site-Directed 13C Solid-State NMR: Changes Due to Association with Phoborhodopsin (Sensory Rhodopsin II) 査読

Satoru Yamaguchi, Kazumi Shimono, Yuki Sudo, Satoru Tuzi, Akira Naito, Naoki Kamo, Hazime Saitô

Biophysical Journal 86 ( 5 ) 3131 - 3140 2004年

Hydrogen Bonding Alteration of Thr-204 in the Complex between pharaonis Phoborhodopsin and Its Transducer Protein 査読

Yuki Sudo, Yuji Furutani, Kazumi Shimono, Naoki Kamo, Hideki Kandori

Biochemistry 42 ( 48 ) 14166 - 14172 2003年12月

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