Updated on 2026/08/04

写真a

 
Ishida Tasuku
 
Organization
Faculty of Environmental, Life, Natural Science and Technology Special-Appointment Assistant Professor
Position
Special-Appointment Assistant Professor
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Degree

  • 博士(理学) ( 2026.3   京都大学 )

Research Interests

  • 神経板境界

  • 尾芽

  • ナメクジウオ

  • 遺伝子制御ネットワーク

  • ホヤ

Education

  • Kyoto University   大学院理学研究科   生物科学専攻

    2023.4 - 2026.3

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  • Kyoto University   大学院理学研究科   生物科学専攻

    2021.4 - 2023.3

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  • Kyoto University   理学部  

    2017.4 - 2021.3

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Research History

  • Okayama University   学術研究院環境生命自然科学学域(理)

    2026.4

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Professional Memberships

 

Papers

  • The tripartite neural plate border is a common trait of vertebrates and tunicates

    Tasuku Ishida, Yutaka Satou

    2026.7

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    Publisher:openRxiv  

    Abstract

    The neural crest and neurogenic placodes, which arise from the neural plate border, give rise to morphological characteristics that distinguish vertebrates from invertebrates (Gans & Northcutt, 1983). Recent studies have suggested that embryos of ascidians, a group of tunicates that are the closest invertebrate relatives of vertebrates, possess cells that share an evolutionary origin with vertebrate neural crest cells (Abitua et al., 2012; Fatieieva et al., 2025; Ishida & Satou, 2024; Stolfi et al., 2015; Todorov et al., 2024; Waki et al., 2015) and neurogenic placode cells (Abitua et al., 2015; Ikeda et al., 2013; Liu et al., 2023; Liu & Satou, 2019; Manni et al., 2004; Mazet et al., 2005; Papadogiannis et al., 2022; Wagner & Levine, 2012). To dissect the neural plate border of ascidian embryos at the molecular level, and to gain deeper insights into evolutionary origins of the neural crest and neurogenic placodes, we comprehensively analyzed expression patterns of transcription factor genes at single-cell resolution. We demonstrated that the ascidian neural plate border consists of three domains with distinct gene expression profiles: the anterior, inner lateral, and outer lateral domains. A cross-species comparison of transcriptomes from ascidians and zebrafish suggests that the anterior domain is homologous to zebrafish neurogenic placodes, the inner lateral domain to the neural crest and tail bud and the outer lateral domain to the median fin fold ectoderm. We propose that a tripartite neural plate border was present in the last common ancestor of vertebrates and tunicates, providing a blueprint for evolutionary emergence of vertebrate morphological novelties.

    DOI: 10.64898/2026.07.29.740271

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  • Ascidian embryonic cells with properties of neural-crest cells and neuromesodermal progenitors of vertebrates Reviewed

    Tasuku Ishida, Yutaka Satou

    Nature Ecology & Evolution   8 ( 6 )   1154 - 1164   2024.4

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    DOI: 10.1038/s41559-024-02387-8

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    Other Link: https://www.nature.com/articles/s41559-024-02387-8

  • Animals have expanded the evolutionary legacy of unicellular ancestors in blood cells

    Yosuke Nagahata, Yuji Nishimura, Ryota Kaitani, Jason Cheok Kuan Leong, Izumi Oda-Ishii, Hisanori Kohtsuka, Shinya Abe, Tasuku Ishida, Marina Carmona-Rivas, Sebastián R. Najle, Elena Casacuberta, Koichi Ikuta, Toru Miura, Michio Ogasawara, Naoki Irie, Yutaka Satou, Iñaki Ruiz-Trillo, Hiroshi Kawamoto

    Proceedings of the National Academy of Sciences   123 ( 23 )   2026.5

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    Publishing type:Research paper (scientific journal)   Publisher:National Academy of Sciences  

    Blood cells are common and unique to animals, enabling them to address critical challenges of defense and transport. Thus, their evolution represents a defining innovation in metazoan multicellular life. However, their evolutionary trajectory about how blood cells emerged and diversified throughout animal history remains unclear. Here, we present a combination of bioinformatics and functional data that demonstrate that the metazoan blood cell program most likely originated through the repurposing of an ancestral premetazoan toolkit governed by Fos . This primordial program established the macrophage-like initial blood cells at the metazoan root. Then, the first lineage bifurcation at the origin of Bilateria drove the emergence of a specialized mast/killer lineage, characterized by acquisition of granular proteases for antiparasitic defense. Subsequent deuterostome/vertebrate innovations branched T/NK and erythrocyte/thrombocyte lineages from mast cells while B cells derived from macrophages. Our data also show that a prototypic thymus formed at the gill edges of a chordate ancestor. In line with the evolutionary history, the modern hematopoietic pathway shows a vestige of the phylogeny; differentiation potentials of phylogenetically old cell lineages expressing Fos such as macrophages and mast cells are widely retained, and ancient HSCs with limited lineage potentials have been inherited as origo-lineage progenitors. Our framework provides the history of blood cells showing an adaptive innovation built upon ancient unicellular foundations.

    DOI: 10.1073/pnas.2528110123

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  • Meeting Report: The First Evo‐Devo Young Researchers Meeting Reviewed

    Yui Uchida, Tasuku Ishida, Satomi Ono, Shunya Kuroda, Aimi Kobayashi, Naoki Konno, Yoshitaka Tanaka, Tetsuro Nishizawa, Junki Yoshida, Ken‐ichiro Yoshimoto, Mizuho Yoneda

    Development, Growth & Differentiation   67 ( 6 )   331 - 335   2025.7

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    Publishing type:Research paper (scientific journal)   Publisher:Wiley  

    DOI: 10.1111/dgd.70016

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  • A Manually Curated Gene Model Set for an Ascidian, Ciona robusta (Ciona intestinalis Type A) Reviewed

    Yutaka Satou, Miki Tokuoka, Izumi Oda-Ishii, Sinichi Tokuhiro, Tasuku Ishida, Boqi Liu, Yuri Iwamura

    Zoological Science   39 ( 3 )   2022.3

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    Publishing type:Research paper (scientific journal)   Publisher:Zoological Society of Japan  

    DOI: 10.2108/zs210102

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Awards

  • 理学研究科銀楓賞

    2025.2   京都大学大学院理学研究科  

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  • 国際会議発表支援川口賞

    2024.3   日本動物学会  

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  • 学生ポスター発表賞 最優秀賞

    2023.9   日本進化学会  

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Research Projects

  • 尾索動物をモデルとした神経堤細胞の幹細胞性の進化的起源の解明

    Grant number:25KJ1652  2025.04 - 2027.03

    日本学術振興会  科学研究費助成事業  特別研究員奨励費

    石田 祐

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    Grant amount:\1600000 ( Direct expense: \1600000 )

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  • 神経中胚葉前駆細胞の進化的起源

    2024.08 - 2025.03

    京都大学大学院理学研究科  京都大学大学院理学研究科 銀楓ファンド 

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    Authorship:Principal investigator 

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Other research activities

  • 令和6年度 京都大学教育研究振興財団 国際研究集会発表助成

    2024.06

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