Updated on 2025/06/06

写真a

 
NISHIDA Hidetaka
 
Organization
Scheduled update Professor
Position
Professor
External link

Degree

  • 博士（農学） ( 京都大学 )

Research Interests

  • plant genetics

  • plant breeding

  • heading time

  • wheat

  • barley

Research Areas

  • Environmental Science/Agriculture Science / Science in plant genetics and breeding

Education

  • 京都大学大学院   農学研究科 博士課程   農学専攻

    1997.4 - 2002.3

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  • 京都大学大学院   農学研究科 修士課程   農学専攻

    1995.4 - 1997.3

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  • Kyoto University   農学部   農学科

    1991.4 - 1995.3

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Research History

  • Okayama University   Institute of Global Human Resource Development   Professor

    2024

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    Country：Japan

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  • Faculty of Environmental, Life, Natural Science and Technology, Okayama University   Professor

    2023.4 - 2024.3

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    Country：Japan

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  • Okayama University   Faculty of Environmental and Life Sciences   Associate Professor

    2021.4 - 2023.3

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  • Okayama University   The Graduate School of Environmental and Life Science   Associate Professor

    2014.4 - 2021.3

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  • Okayama University   The Graduate School of Environmental and Life Science   Assistant Professor

    2012.4 - 2014.3

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  • Okayama University   The Graduate School of Natural Science and Technology   Assistant Professor

    2004.1 - 2012.3

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  • 東京大学大学院   産学官連携研究員

    2002.7 - 2004.1

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  • 京都大学大学院   研修員

    2002.4 - 2002.7

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Professional Memberships

Committee Memberships

  • 日本育種学会   総務担当運営委員（総務第一）  

    2022.4 - 2024.3   

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    Committee type：Academic society

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  • 日本育種学会   総務担当運営委員（総務第二）  

    2020.4 - 2022.3   

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    Committee type：Academic society

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  • Chugoku Branch Meeting of Japanese Society of Breeding   Organizer  

    2017.4   

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Papers

  • Molecular polymorphisms of the nuclear and chloroplast genomes among African melon germplasms reveal abundant and unique genetic diversity, especially in Sudan. International journal

    Odirichi Nnennaya Imoh, Gentaro Shigita, Mitsuhiro Sugiyama, Tran Phuong Dung, Katsunori Tanaka, Mami Takahashi, Kazusa Nishimura, Yuki Monden, Hidetaka Nishida, Mashaer Goda, Michel Pitrat, Kenji Kato

    Annals of botany   2025.4

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    Language：English   Publishing type：Research paper (scientific journal)  

    BACKGROUND AND AIMS: Africa is rich in wild species of Cucumis and is considered one of the origins of melon. However, our knowledge of African melon is limited, and genetic studies using melon germplasms with wide geographical coverage are required. Here, we analyzed the genetic structure of African melons, with emphasis on Sudan. METHODS: Ninety-seven accessions of African melon were examined along with 77 reference accessions representing Asian melon and major horticultural groups. Molecular polymorphisms in the nuclear and chloroplast genomes were investigated using 12 RAPD, 7 SSR, and 3 SNP markers. Horticultural traits, including seed size, were measured for 46 accessions, mainly from Sudan. KEY RESULTS: African melons were divided into large and small seed-types based on seed length: large seed-type from Northern Africa and small seed-type from Western and Southern Africa. Both seed types are common in Sudan. Molecular genetic diversity in these geographical populations was as high as in India, the Asian center of melon domestication. Large seed-type from Northern Africa were assigned to Pop4 by structure analysis and had Ib cytoplasm in common with Cantalupensis, Inodorus, and Flexuosus. Small seed-types were highly diversified and geographically differentiated; specifically, Pop1 with Ia cytoplasm in Southern Africa and South Asia, Pop2 with Ia in East Asia, including Conomon and Makuwa, and Pop3 with Ia or Ic in Africa. Sudanese small seed-types were grouped in Pop3, while their cytoplasm type was the mixture of Ia and Ic. Sudanese Tibish had Ic cytoplasm that was unique in Africa, common in Western Africa and Sudan, and also found in wild or feral types. CONCLUSIONS: Melon of Ic lineage, including Tibish, originated from wild melon in the "western Sudan region," and independently of melon with Ia or Ib cytoplasm that originated in Asia. This clearly indicates the polyphyletic origin of melon.

    DOI： 10.1093/aob/mcaf028

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  • Workflow for development of CAPS markers with one type of restriction enzyme to identify citrus cultivars Reviewed

    Kazusa Nishimura, Maho Okuma, Junko Kaneyoshi, Atsu Yamasaki, Kyoka Nagasaka, Kazuki Murata, Yuki Monden, Kenji Kato, Hidetaka Nishida, Tetsuya Nakazaki, Ryohei Nakano

    Tree Genetics & Genomes   20 ( 5 )   2024.8

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    Language：English   Publishing type：Research paper (scientific journal)   Publisher：Springer Science and Business Media LLC  

    Abstract

    Given the ease of propagating fruit tree species through cloning, the economic viability of their breeding programs hinges on protecting breeders' rights. This necessitates the development of highly accurate DNA markers for cultivar identification. Here, we present a methodology for the rapid design of cleaved amplified polymorphic sequence (CAPS) markers to discriminate newly bred Japanese citrus cultivars from genetically related cultivars. We first compared the performance of ddRAD-seq and MIG-seq in citrus germplasm. The ddRAD-seq libraries generated using EcoRI and HindIII restriction enzymes yielded the highest number of polymorphisms. Subsequently, ddRAD-seq with EcoRI and HindIII was employed to analyze 29 citrus cultivars and thus identify 331,801 genome-wide polymorphisms. A semi-automated bioinformatics pipeline was then utilized to identify candidate CAPS markers, resulting in the discovery of 14,072 potential markers. Of these candidates, 52 were chosen for validation based on their recognition by the PstI restriction enzyme. This evaluation resulted in the development of 11 highly discriminative CAPS markers. Remarkably, a combination of only six such markers was sufficient to differentiate newly bred cultivars from their genetically related parents. The single restriction enzyme employed for these markers facilitates straightforward multiplexing. Finally, a combination of one multiplex marker testing two loci and four singleplex markers was successfully selected that completely discriminated the cultivars other than the bud sports used in this study. The pipeline established here extends beyond citrus and has the potential to simplify marker development and cultivar protection in various plant species.

    DOI： 10.1007/s11295-024-01661-x

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    Other Link： https://link.springer.com/article/10.1007/s11295-024-01661-x/fulltext.html

  • Genetic characterization of cucumber genetic resources in the NARO Genebank indicates their multiple dispersal trajectories to the East Reviewed

    Gentaro Shigita, Koichiro Shimomura, Tran Phuong Dung, Naznin Pervin Haque, Thuy Thanh Duong, Odirich Nnennaya Imoh, Yuki Monden, Hidetaka Nishida, Katsunori Tanaka, Mitsuhiro Sugiyama, Yoichi Kawazu, Norihiko Tomooka, Kenji Kato

    Theoretical and Applied Genetics   137 ( 7 )   2024.7

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    Language：English   Publishing type：Research paper (scientific journal)   Publisher：Springer Science and Business Media LLC  

    Abstract

    Key message

    Genotyping-by-sequencing of 723 worldwide cucumber genetic resources revealed that cucumbers were dispersed eastward via at least three distinct routes, one to Southeast Asia and two from different directions to East Asia.

    Abstract

    The cucumber (Cucumis sativus) is an economically important vegetable crop cultivated and consumed worldwide. Despite its popularity, the manner in which cucumbers were dispersed from their origin in South Asia to the rest of the world, particularly to the east, remains a mystery due to the lack of written records. In this study, we performed genotyping-by-sequencing (GBS) on 723 worldwide cucumber accessions, mainly deposited in the Japanese National Agriculture and Food Research Organization (NARO) Genebank, to characterize their genetic diversity, relationships, and population structure. Analyses based on over 60,000 genome-wide single-nucleotide polymorphisms identified by GBS revealed clear genetic differentiation between Southeast and East Asian populations, suggesting that they reached their respective region independently, not progressively. A deeper investigation of the East Asian population identified two subpopulations with different fruit characteristics, supporting the traditional classification of East Asian cucumbers into two types thought to have been introduced by independent routes. Finally, we developed a core collection of 100 accessions representing at least 93.2% of the genetic diversity present in the entire collection. The genetic relationships and population structure, their associations with geographic distribution and phenotypic traits, and the core collection presented in this study are valuable resources for elucidating the dispersal history and promoting the efficient use and management of genetic resources for research and breeding in cucumber.

    DOI： 10.1007/s00122-024-04683-0

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    Other Link： https://link.springer.com/article/10.1007/s00122-024-04683-0/fulltext.html

  • Polyphyletic domestication and inter-lineage hybridization magnified genetic diversity of cultivated melon, Cucumis melo L

    Katsunori Tanaka, Gentaro Shigita, Tran Phuong Dung, Phan Thi Phuong Nhi, Mami Takahashi, Yuki Monden, Hidetaka Nishida, Ryuji Ishikawa, Kenji Kato

    bioRxiv   2024.7

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    Publisher：Cold Spring Harbor Laboratory  

    Abstract

    A total of 212 melon accessions with diverse geographical origins were classified into large and small seed-types by length of seed at the boundary of 9 mm, and into five populations based on polymorphisms in the nuclear genome. They were further divided into three maternal lineages, Ia, Ib, and Ic, by polymorphisms in the chloroplast genome. By combining these three classifications, the Europe/US subsp.meloand the East Asian subsp.agrestiswere characterized as [large seed, Ib, PopA1 or A2] and [small seed, Ia, PopB1 or B2], respectively, indicating nearly perfect divergence in both nuclear and cytoplasm genomes. In contrast, in South and Southeast Asia, in addition to the Europe/US and East Asian types, recombinant types were also frequently found, indicating unclear genetic differentiation in South and Southeast Asia. Such an intermixed structure of genetic variation supported the Indian origin of Ia and Ib types of melon. Seed length was intermediate, between the large and small seed-types, and chloroplast type was a mixture of Ia and Ib in Momordica, suggesting its origin from the recombinant type. In Africa, three lineages of melon were distributed allopatrically and showed distinct divergence. Subsp.agrestisof the Ic type proved to be endemic to Africa, indicating its African origin.

    DOI： 10.1101/2024.06.27.601017

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  • Growth and yield-related traits of near-isogenic wheat lines carrying different alleles at the Vrn-D1 locus Reviewed

    Hiromi Matsuyama, Hiroko Sawada, Masaya Fujita, Masako Seki, Hidetaka Nishida, Kenji Kato

    Plant Production Science   1 - 11   2024.6

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    Publishing type：Research paper (scientific journal)   Publisher：Informa UK Limited  

    DOI： 10.1080/1343943x.2024.2363547

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  • Analysis of genetic diversity and population structure in Cambodian melon landraces using molecular markers Reviewed

    Pervin Mst Naznin, Odirichi Nnennaya Imoh, Katsunori Tanaka, Ouch Sreynech, Gentaro Shigita, Yon Sophea, Sakhan Sophany, Ouk Makara, Norihiko Tomooka, Yuki Monden, Hidetaka Nishida, Kenji Kato

    Genetic Resources and Crop Evolution   2023.7

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    Publishing type：Research paper (scientific journal)   Publisher：Springer Science and Business Media LLC  

    Abstract

    Genetic diversity of Cambodian melons was evaluated by the analysis of 12 random amplified polymorphic DNA (RAPD) and 7 simple sequence repeat (SSR) markers using 62 accessions of melon landraces and compared with 231 accessions from other areas for genetic characterization of Cambodian melons. Among 62 accessions, 56 accessions were morphologically classified as small-seed type with seed lengths shorter than 9 mm, as in the horticultural groups Conomon and Makuwa. Gene diversity of Cambodian melons was 0.228, which was equivalent to those of the groups Conomon and Makuwa and smaller than those of Vietnamese and Central Asian landraces. A phylogenetic tree constructed from a genetic distance matrix classified 293 accessions into three major clusters. Small-seed type accessions from East and Southeast Asia formed clusters I and II, which were distantly related with cluster III consisting of large-seed type melon from other areas. All Cambodian melons belonged to cluster I (except three accessions) along with those from Thailand, Myanmar, Yunnan (China), and Vietnam (“Dua thom” in the northwest), thus indicating genetic similarity in these areas. In addition, the Cambodian melons were not differentiated among geographical populations. Conomon and Makuwa were classified into cluster II, together with melon groups from the plains of Vietnam. The presence of two groups of melons in Southeast Asia was also indicated by population structure and principal coordinate analysis. These results indicated a close genetic relationship between Cambodia and the neighboring countries, thus suggesting that Cambodian melons are not directly related to the establishment of Conomon and Makuwa.

    DOI： 10.1007/s10722-023-01677-7

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    Other Link： https://link.springer.com/article/10.1007/s10722-023-01677-7/fulltext.html

  • Melon diversity on the Silk Road by molecular phylogenetic analysis in Kazakhstan melons

    Katsunori Tanaka, Mitsuhiro Sugiyama, Gentaro Shigita, Ryoma Murakami, Thanh-Thuy Duong, Yasheng Aierken, Anna M Artemyeva, Zharas Mamypbelov, Ryuji Ishikawa, Hidetaka Nishida, Kenji Kato

    Breeding Science   73 ( 2 )   219 - 229   2023

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    Publishing type：Research paper (scientific journal)   Publisher：Japanese Society of Breeding  

    DOI： 10.1270/jsbbs.22030

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  • Elucidation of genetic variation and population structure of melon genetic resources in the NARO Genebank, and construction of the World Melon Core Collection Reviewed

    Gentaro Shigita, Tran Phuong Dung, Mst. Naznin Pervin, Thanh-Thuy Duong, Odirich Nnennaya Imoh, Yuki Monden, Hidetaka Nishida, Katsunori Tanaka, Mitsuhiro Sugiyama, Yoichi Kawazu, Norihiko Tomooka, Kenji Kato

    Breeding Science   2023

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    Publishing type：Research paper (scientific journal)   Publisher：Japanese Society of Breeding  

    DOI： 10.1270/jsbbs.22071

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  • Fruit trait and seed size measurements and molecular phylogenetic analysis of Kazakhstan melon as an example of melon development on the Silk Road

    Kenji Kato, Katsunori Tanaka, Mitsuhiro Sugiyama, Gentaro Shigita, Ryoma Murakami, Thanh-Thuy Duong, Yasheng Aierken, Anna M Artemyeva, Zharas Mamypbelov, Ryuji Ishikawa, Hidetaka Nishida

    Research Square   2022.3

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    Publisher：Research Square Platform LLC  

    Abstract

    Melons from the famous Silk Road have not been studied for their population structure, phylogenetic relationship, and diversity, which suggests their need for genetic study and breeding. Measurements of fruit and seed traits and a phylogenetic analysis of five chloroplast genome markers, 17 RAPD markers and 11 SSR markers were conducted for 87 Kazakh melon accessions with reference accessions. Fruit weight and shape was highly variable across Kazakh melons and was highly correlated with fruit length, fruit width, and pulp thickness. Fruit length could characterize Kazakh melon groups, while pulp thickness associated with fruit width was conserved due to culinary use, as was pulp sweetness. Molecular phylogeny showed that two unique genetic groups, STIa-2 with Ib-1/-2 cytoplasm and STIa-1 with Ib-3 cytoplasm, and one admixed group, STIAD combined with STIa and STIb, were prevalent across all Kazakh melon groups. STIAD melons that phylogenetically overlapped with STIa-1 and STIa-2 melons were frequent in the eastern Silk Road region, including Kazakhstan. Evidently, a small population contributed to melon development and variation in the historical record of the eastern Silk Road. Conscious preservation of fruit traits specific to Kazakh melon groups, with andromonoecy, is thought to play a role in the conservation of Kazakh melon genetic variation during melon production, where hybrid progenies were generated through open pollination. This overview of fruit phenotypic and molecular variation supports the belief that recurrent selection for edible parts after crop domestication involves varietal variation.

    DOI： 10.21203/rs.3.rs-1439317/v1

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    Other Link： https://www.researchsquare.com/article/rs-1439317/v1.html

  • Distribution of Two Groups of Melon Landraces and Inter-Group Hybridization Enhanced Genetic Diversity in Vietnam Reviewed

    Duong, T. T, Dung T. P, Tanaka, K., Nhi, P. T. P, Shigita, G, Imoh, O. N, Nishida, H, Kato, K

    Breeding Science   71 ( 5 )   564 - 574   2021.11

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1270/jsbbs.20090

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  • Growth of Barley Cultivars Differed in Heading Characteristics in Cold Climates Reviewed

    The Hokuriku crop science   56   17 - 22   2021.3

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    Authorship：Last author   Language：Japanese   Publishing type：Research paper (scientific journal)  

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  • Seed size and chloroplast DNA of modern and ancient seeds explain the establishment of Japanese cultivated melon (Cucumis melo L.) by introduction and selection Reviewed

    Katsunori Tanaka, Chris J. Stevens, Shiho Iwasaki, Yukari Akashi, Etsuyo Yamamoto, Tran Phuong Dung, Hidetaka Nishida, Dorian Q. Fuller, Kenji Kato

    GENETIC RESOURCES AND CROP EVOLUTION   63 ( 7 )   1237 - 1254   2016.10

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    DOI： 10.1007/s10722-015-0314-7

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  • Loss-of-Function Mutations in Three Homoeologous PHYTOCLOCK 1 Genes in Common Wheat Are Associated with the Extra-Early Flowering Phenotype Reviewed

    Nobuyuki Mizuno, Mika Kinoshita, Saki Kinoshita, Hidetaka Nishida, Masaya Fujita, Kenji Kato, Koji Murai, Shuhei Nasuda

    PLoS One   11 ( 10 )   e0165618   2016.10

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    DOI： 10.1371/journal.pone.0165618

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  • The effects of phytochrome-mediated light signals on the developmental acquisition of photoperiod sensitivity in rice Reviewed

    Yoshihiro Yoshitake, Takayuki Yokoo, Hiroki Saito, Takuji Tsukiyama, Xu Quan, Kazunori Zikihara, Hitomi Katsura, Satoru Tokutomi, Takako Aboshi, Naoki Mori, Hiromo Inoue, Hidetaka Nishida, Takayuki Kohchi, Masayoshi Teraishi, Yutaka Okumoto, Takatoshi Tanisaka

    SCIENTIFIC REPORTS   5   7709   2015.1

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1038/srep07709

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  • Fine mapping and epistatic interactions of the vernalization gene VRN-D4 in hexaploid wheat Reviewed

    Nestor Kippes, Jie Zhu, Andrew Chen, Leonardo Vanzetti, Adam Lukaszewski, Hidetaka Nishida, Kenji Kato, Jan Dvorak, Jorge Dubcovsky

    MOLECULAR GENETICS AND GENOMICS   289 ( 1 )   47 - 62   2014.2

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1007/s00438-013-0788-y

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  • Phytochrome C is a key factor controlling long-day flowering in barley Reviewed

    Hidetaka Nishida, Daisuke Ishihara, Makoto Ishii, Takuma Kaneko, Hiroyuki Kawahigashi, Yukari Akashi, Daisuke Saisho, Katsunori Tanaka, Hirokazu Handa, Kazuyoshi Takeda, Kenji Kato

    Plant Physiology   163 ( 2 )   804 - 814   2013.10

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1104/pp.113.222570

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  • Distribution of photoperiod-insensitive allele Ppd-A1a and its effect on heading time in Japanese wheat cultivars. Reviewed

    Masako Seki, Makiko Chono, Tsutomu Nishimura, Mikako Sato, Yasuhiro Yoshimura, Hitoshi Matsunaka, Masaya Fujita, Shunsuke Oda, Katashi Kubo, Chikako Kiribuchi-Otobe, Hisayo Kojima, Hidetaka Nishida, Kenji Kato

    Breeding science   63 ( 3 )   309 - 16   2013.9

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1270/jsbbs.63.309

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  • Diversification and genetic differentiation of cultivated melon inferred from sequence polymorphism in the chloroplast genome Reviewed

    Katsunori Tanaka, Yukari Akashi, Kenji Fukunaga, Tatsuya Yamamoto, Yasheng Aierken, Hidetaka Nishida, Chun Lin Long, Hiromichi Yoshino, Yo-Ichiro Sato, Kenji Kato

    BREEDING SCIENCE   63 ( 2 )   183 - 196   2013.6

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1270/jsbbs.63.183

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  • Structural variation in the 5′ upstream region of photoperiod-insensitive alleles Ppd-A1a and Ppd-B1a identified in hexaploid wheat (Triticum aestivum L.), and their effect on heading time Reviewed

    Hidetaka Nishida, Tetsuya Yoshida, Kohei Kawakami, Masaya Fujita, Bo Long, Yukari Akashi, David A. Laurie, Kenji Kato

    Molecular Breeding   31 ( 1 )   27 - 37   2013

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1007/s11032-012-9765-0

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  • Distribution of photoperiod-insensitive alleles Ppd-B1a and Ppd-D1a and their effect on heading time in Japanese wheat cultivars. Reviewed

    Masako Seki, Makiko Chono, Hitoshi Matsunaka, Masaya Fujita, Shunsuke Oda, Katashi Kubo, Chikako Kiribuchi-Otobe, Hisayo Kojima, Hidetaka Nishida, Kenji Kato

    Breeding science   61 ( 4 )   405 - 12   2011.12

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1270/jsbbs.61.405

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  • Molecular Analysis of the Genetic Diversity of Chinese Hami Melon and Its Relationship to the Melon Germplasm from Central and South Asia Reviewed

    Yasheng Aierken, Yukari Akashi, Phan Thi Phuong Nhi, Yikeremu Halidan, Katsunori Tanaka, Bo Long, Hidetaka Nishida, Chunlin Long, Min Zhu Wu, Kenji Kato

    JOURNAL OF THE JAPANESE SOCIETY FOR HORTICULTURAL SCIENCE   80 ( 1 )   52 - 65   2011.1

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.2503/jjshs1.80.52

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  • Complete loss of photoperiodic response in the rice mutant line X61 is caused by deficiency of phytochrome chromophore biosynthesis gene Reviewed

    Hiroki Saito, Yutaka Okumoto, Yoshihiro Yoshitake, Hiromo Inoue, Qingbo Yuan, Masayoshi Teraishi, Takuji Tsukiyama, Hidetaka Nishida, Takatoshi Tanisaka

    THEORETICAL AND APPLIED GENETICS   122 ( 1 )   109 - 118   2011.1

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1007/s00122-010-1426-2

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  • Flowering traits and their genetic basis in the ancestral tetraploid wheat varieties 'Emmer' and 'Pyramidale' Reviewed

    Nakazaki Tetsuya, Moriyama Ryuji, Kagata Hisashi, Wakahara Hiroyoshi, Naito Mika, Katsura Keisuke, Saito Hiroki, Kato Kenji, Nishida Hidetaka, Kawahara Taihachi, Fudano Takashi, Kitajima Akira

    Journal of Crop Research   56   67 - 71   2011

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    Language：Japanese   Publisher：The Society of Crop Science and Breeding in Kinki, Japan  

    The flowering traits of 'Emmer' and 'Pyramidale', two ancestral wheat varieties that are now used to make two types of beer brewed in partnership with Kyoto University scientists, were investigated in detail. These varieties are classified as T. turgidum L. ssp. dicoccon and ssp. turanicum, respectively, and little information is available about their agronomic characteristics. Through evaluation of the internal factors determining their flowering time (photoperiodic response, vernalization requirement and narrow-sense earliness), we revealed that the two varieties are spring-habit and photoperiod-sensitive. While the narrow-sense earliness of 'Emmer' is less intense than that of 'Pyramidale', the photoperiodic response of 'Emmer' is more intense than that of 'Pyramidale'. Based on a genetic analysis using the F2 population of the two varieties, we concluded that 'Pyramidale' harbors a photoperiod-insensitive allele in the Ppd-A1 locus, the same allele reported by Wilhelm et al. (2009). This photoperiod-insensitive allele is expected to be a useful genetic resource in the breeding of tetraploid and hexaploid wheat.

    DOI： 10.18964/jcr.56.0_67

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  • Genetic diversity in Vietnamese melon landraces revealed by the analyses of morphological traits and nuclear and cytoplasmic molecular markers Reviewed

    Phan Thi Phuong Nhi, Yukari Akashi, Tran Thi Minh Hang, Katsunori Tanaka, Yasheng Aierken, Tatsuya Yamamoto, Hidetaka Nishida, Chunlin Long, Kenji Kato

    BREEDING SCIENCE   60 ( 3 )   255 - 266   2010.9

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1270/jsbbs.60.255

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  • Vrn-D4 is a vernalization gene located on the centromeric region of chromosome 5D in hexaploid wheat Reviewed

    Tetsuya Yoshida, Hidetaka Nishida, Jie Zhu, Rebecca Nitcher, Assaf Distelfeld, Yukari Akashi, Kenji Kato, Jorge Dubcovsky

    THEORETICAL AND APPLIED GENETICS   120 ( 3 )   543 - 552   2010.2

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1007/s00122-009-1174-3

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  • Molecular analysis of genetic diversity in melon landraces (Cucumis melo L.) from Myanmar and their relationship with melon germplasm from East and South Asia Reviewed

    San San Yi, Yukari Akashi, Katsunori Tanaka, Tin Tin Cho, May Thin Khaing, Hiromichi Yoshino, Hidetaka Nishida, Tatsuya Yamamoto, Kyaw Win, Kenji Kato

    GENETIC RESOURCES AND CROP EVOLUTION   56 ( 8 )   1149 - 1161   2009.12

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1007/s10722-009-9438-y

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  • Identification of a novel gene ef7 conferring an extremely long basic vegetative growth phase in rice Reviewed

    Qingbo Yuan, Hiroki Saito, Yutaka Okumoto, Hiromo Inoue, Hidetaka Nishida, Takuji Tsukiyama, Masayoshi Teraishi, Takatoshi Tanisaka

    THEORETICAL AND APPLIED GENETICS   119 ( 4 )   675 - 684   2009.8

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1007/s00122-009-1078-2

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  • Molecular characterization of South and East Asian melon, Cucumis melo L., and the origin of Group Conomon var. makuwa and var. conomon revealed by RAPD analysis Reviewed

    Katsunori Tanaka, Atsushi Nishitani, Yukari Akashi, Yoshiteru Sakata, Hidetaka Nishida, Hiromichi Yoshino, Kenji Kato

    EUPHYTICA   153 ( 1-2 )   233 - 247   2007.1

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1007/s10681-006-9259-4

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  • Genetic diversity and phylogenetic relationships among East Asian common wheat (Triticum aestivum L.) populations, revealed by the analysis of five isozymes Reviewed

    Surya Kant Ghimire, Yukari Akashi, Akiko Masuda, Tatsuki Washio, Hidetaka Nishida, Yong-Hong Zhou, Chi Yen, Xu Qi, Zhang Li, Hiromichi Yoshino, Kenji Kato

    BREEDING SCIENCE   56 ( 4 )   379 - 387   2006.12

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    Language：English   Publishing type：Research paper (scientific journal)  

    DOI： 10.1270/jsbbs.56.379

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  • Polyphyletic Origin of Cultivated Melon Inferred from Analysis of its Chloroplast Genome.

    Tanaka, K, K. Fukunaga, M. T. Khaing, Y. Akashi, H. Nishida, K. Kato

    Cucurbit. Proc. 2006   372 - 379   2006

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  • Polyphyletic origins of cultivated melon inferred by nuclear and chroloplast genomes.

    Tanaka, K, Y. Akashi, K. Fukunaga, H. Nishida, Y. Yoshino, K.Kato

    10th International Congress of SABRAO   2005

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  • イネ極早生突然変系統Ｘ６１がもつ感光性抑制遺伝子の同定 Reviewed

    中山拓, 西田英隆, 奥本裕, 中崎鉄也, 谷坂隆俊

    近畿作物・育種研究   ( 49 )   37 - 40   2004.7

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  • Mobilization of a transposon in the rice genome Reviewed

    T Nakazaki, Y Okumoto, A Horibata, S Yamahira, M Teraishi, H Nishida, H Inoue, T Tanisaka

    NATURE   421 ( 6919 )   170 - 172   2003.1

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    DOI： 10.1038/nature01219

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  • A novel gene ef1-h conferring an extremely long basic vegetative growth period in rice Reviewed

    H Nishida, H Inoue, Y Okumoto, T Tanisaka

    CROP SCIENCE   42 ( 2 )   348 - 354   2002.3

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  • Interactive effects of two heading-time loci, Se1 and Ef1, on pre-flowering developmental phases in rice (Oryza sativa L.) Reviewed

    K Ichitani, H Inoue, H Nishida, Y Okumoto, T Tanisaka

    EUPHYTICA   126 ( 2 )   227 - 234   2002

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    DOI： 10.1023/A:1016357511738

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  • Analysis of tester lines for rice (Oryza sativa L.) heading-time genes using reciprocal photoperiodic transfer treatments Reviewed

    H Nishida, Y Okumoto, H Nakagawa, K Ichitani, H Inoue, T Tanisaka

    ANNALS OF BOTANY   88 ( 4 )   527 - 536   2001.10

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    DOI： 10.1006/anbo.2001.1490

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  • Identification of an early heading time gene found in the Taiwanese rice cultivar Taichung 65 Reviewed

    H Inoue, H Nishida, Y Okumoto, T Tanisaka

    BREEDING SCIENCE   48 ( 2 )   103 - 108   1998.6

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    DOI： 10.1270/jsbbs1951.48.103

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Books

  • 農業 令和元年（2019）7月号

    西田英隆（ Role： Joint author ,  コムギの起源地を訪ねて ―南コーカサスと中央アジアにおける遺伝資源探索―）

    公益社団法人大日本農会  2019.7 

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  • 科学 2017年10月号

    西田英隆（ Role： Joint author ,  シルクロードを旅した栽培植物：コムギ編）

    岩波書店  2017.7 

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  • 麦の自然史 : 人と自然が育んだムギ農耕

    佐藤 洋一郎, 加藤 鎌司, 河原 太八, 渡部 武, 森 直樹, 辻本 壽, 丹野 研一, 有村 誠, 西田 英隆, 武田 和義, 森川 利信, 冨永 達, 長野 宏子, 大田 正次, 吉村 作治, 笹沼 恒男

    北海道大学出版会  2010  （ ISBN:9784832981904 ）

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MISC

  • Exploration and comparative analysis of nematode resistance loci in hexaploid sweetpotato with GWAS, QTL mapping, and k-mer based bulk segregation analysis

    栗原未結, 田淵宏朗, 西村和紗, 西田英隆, 加藤鎌司, 門田有希

    育種学研究   26   2024

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  • Identification of genetic region related to the anthocyanin accumulation in sweetpotato storage roots and sequence analysis of the candidate gene

    堀田望未, 岡田吉弘, 神崎浩, 栗原未結, 西村和紗, 西田英隆, 加藤鎌司, 門田有希

    育種学研究   26   2024

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  • Revealing the competition between sweetpotato and southern root knot nematode by transcriptome analysis

    泉谷真, 大畑慎一郎, 田淵宏朗, 西田英隆, 加藤鎌司, 門田有希

    育種学研究   25   2023

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  • High-dense genetic linkage map using multiple-dose markers and random-effect multiple QTL mapping of root-knot nematode resistance in hexaploid sweetpotato

    栗原未結, 田淵宏朗, 加藤鎌司, 西田英隆, 門田有希

    育種学研究   25   2023

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  • Identification and comparative analysis of QTLs related to sweetpotato yield using multiple reference genome sequences

    堀田望未, 岡田吉弘, 栗原未結, 西田英隆, 加藤鎌司, 門田有希

    育種学研究   25   2023

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  • Identification of QTLs controlling the resistance to multiple races of southern root-knot nematode and development of DNA markers for resistance selection

    栗原未結, 田淵宏朗, 白澤健太, 磯部祥子, 西田英隆, 加藤鎌司, 門田有希

    育種学研究   24   2022

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  • Sequence mutations in the cis-regulatory elements of a candidate gene controlling southern root knot nematode resistance in sweetpotato

    泉谷真, 大畑慎一郎, 田淵宏朗, 西田英隆, 加藤鎌司, 門田有希

    育種学研究   24   2022

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  • Earliness effect of novel sequence variants of Ppd-B1 in wheat

    加藤鎌司, 西田英隆

    育種学研究   23   2021

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  • Effects of HvELF3 and HvPhyC on flowering time under field conditions in barley

    矢島沙織, 加藤鎌司, 西田英隆

    育種学研究   23   2021

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  • PCR-based genotyping for chloroplast sequence inferred to wild species of Cucumis closely related to melon

    長井朋美, 丸山純, 田中克典, 鴫田玄太郎, 鴫田玄太郎, NNENNAYA Imoh Odirichi, 西田英隆, 加藤鎌司

    育種学研究   23   2021

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  • Genetic analysis of QTLs related with prostrate trait in barley

    福嶋七海, 下戸航平, 西田英隆, 加藤鎌司

    育種学研究   23   2021

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  • Genetic diversity analysis and selection of core collection candidates based on genome-wide GBS-SNPs in melon genetic resources

    鴫田玄太郎, 鴫田玄太郎, PHUONG DUNG Tran, PERVIN Mst. Naznin, NNENNAYA IMOH Odirichi, 門田有希, 西田英隆, 田中克典, 杉山充啓, 川頭洋一, 加藤鎌司

    育種学研究   22   2020

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  • Detection of novel heading-time related QTLs carried by “Kashimamugi“ × “Ishukushirazu“ RILs in barley

    西田英隆, 佐藤桃, 横田真吾, 青木恵美子, 加藤鎌司

    育種学研究   22   2020

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  • Effects of genotypes for photoperiod response, HvPhyC, HvCK2α, and type of growth habit on barley young spike development

    関昌子, 青木恵美子, 西田英隆, 青木秀之, 中田克, 柳澤貴司, 長嶺敬, 加藤鎌司

    育種学研究   22   2020

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  • Sequence analysis of heading-time related genes of which expression levels are different by HvCEN genotype in barley

    岩本健, 横田真吾, 田部涼太, 加藤鎌司, 西田英隆

    育種学研究   22   2020

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  • Effects of the PCL1 genes in a winter-type near-isogenic lines of bread wheat cv. “Yumeshiho“

    藤田雅也, 小島久代, 藤郷誠, 乙部千雅子, 西田英隆, 加藤鎌司

    育種学研究   22   2020

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  • Vietnamese melon landraces consisted of two genetic groups

    THUY Duong Thanh, DUNG Tran Phuong, 田中克典, NHI Phan Thi Phuong, 鴫田玄太郎, IMOH Odirichi Nnennaya, 西田英隆, 加藤鎌司

    育種学研究   22   2020

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  • Map-based identification of earliness gene PCL1-3B in a Japanese breeding line “Chogokuwase”

    Hidetaka Nishida, Numanul Haque, Hinako Sato, Nobuyuki Mizuno, Masaya Fujita, Shuhei Nasuda, Kenji Kato

    1st International Wheat Conference Poster Proceedings   297   2019.7

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  • ゲノムワイドなGBS-SNPsデータに基づくキュウリ遺伝資源の多様性解析とコアコレクション候補の選定

    鴫田玄太郎, PHUONG DUNG Tran, PERVIN Mst.Naznin, 西田英隆, 門田有希, 杉山充啓, 田中克典, 加藤鎌司

    育種学研究   21   2019

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  • オオムギ2H染色体の新規早生QTLが出穂期関連遺伝子の発現パターンに及ぼす影響

    西田英隆, 岩本健, 横田真吾, 青木恵美子, 加藤鎌司

    育種学研究   21   2019

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  • LUX/PCL1はコムギの超極早生遺伝子である

    佐藤日向子, HAQUE G. K. M. N, 西田英隆, 水野信之, 藤田雅也, 那須田周平, 加藤鎌司

    育種学研究   20   47   2018.9

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  • 低温要求性の異なるコムギ品種「ユメシホウ」の準同質遺伝子系統の育成とその生育特性

    藤田雅也, 藤郷誠, 高山敏之, 高山敏之, 乙部千雅子, 西田英隆, 加藤鎌司

    育種学研究   20   187   2018.9

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  • 国内3試験地におけるオオムギ春化要求性及び日長反応性遺伝子型の効果

    関昌子, 青木恵美子, 吉岡藤治, 西田英隆, 青木秀之, 柳澤貴司, 高橋飛鳥, 中田克, 長嶺敬, 加藤鎌司

    育種学研究   20   2018

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  • ゲノムワイドなSNPsデータを用いた国内外のメロン382系統の多様性・類縁関係の解析

    鴫田玄太郎, NAZNIN Pervin Mst., DUNG Tran Phuong, 西田英隆, 門田有希, 杉山充啓, 田中克典, 加藤鎌司

    育種学研究   20   2018

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  • 出穂期安定性が異なるオオムギ早生品種「カシマムギ」と「イシュクシラズ」のRILs集団における圃場出穂期の年次間比較

    西田英隆, 横田真吾, 青木恵美子, 加藤鎌司

    育種学研究   20   2018

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  • 日長反応性遺伝子の異なるオオムギ準同質遺伝子系統における幼穂発育と出穂性の差異

    青木恵美子, 関昌子, 西田英隆, 加藤鎌司, 柳澤貴司

    育種学研究   20   2018

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  • コムギ新規早生遺伝子PCL1‐3A,PCL1‐3Dの早生対立変異の地理的分布と起源

    加藤鎌司, HAQUE G.K.M.N, 佐藤日向子, 西田英隆, 水野信之, 藤田雅也, 那須田周平

    育種学研究   19   38   2017.10

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  • RNA‐Seq法によるコムギ系統「超極早生」及びその交雑後代系統における出穂期関連遺伝子の発現比較

    西田英隆, 増田春花, 水野信之, 那須田周平, 藤田雅也, 加藤鎌司

    育種学研究   19   84   2017.3

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  • コムギ3B染色体に座乗する「超極早生」遺伝子領域の絞り込み

    佐藤日向子, HAQUE G. K. M. N, 増田春花, 山下洋士, 西田英隆, 水野信之, 藤田雅也, 那須田周平, 加藤謙司

    育種学研究   19   272   2017.3

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  • RNA-seq法により見出されたオオムギ2H染色体の新規早生QTLが出穂期関連遺伝子の発現に及ぼす影響

    西田英隆, 横田真吾, 田部涼太, 加藤鎌司

    育種学研究   19   2017

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  • コムギ3B染色体長腕に座乗する「超極早生」遺伝子の詳細マッピング

    増田春花, HAQUE G. K. M. N, 山下洋士, 西田英隆, 水野信之, 藤田雅也, 那須田周平, 加藤鎌司

    育種学研究   18   23   2016.9

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  • オオムギ2H染色体に見出された新規早生遺伝子の座乗領域の絞り込み

    西田英隆, 田部涼太, 小堀夏寿美, 加藤鎌司

    育種学研究   18   2016

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  • コムギ品種Ciano67の7A染色体に座乗する早生遺伝子の解析

    加藤鎌司, 田部涼太, 岸井正浩, 西田英隆

    育種学研究   18   2016

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  • GBS法を利用したメロン遺伝資源の多様性解析

    PERVIN Mst. Naznin, 鴫田玄太郎, 西田英隆, 門田有希, 杉山充啓, 田中克典, 加藤鎌司

    育種学研究   18   2016

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  • 国内のオオムギ品種における出穂期遺伝子HvCENの効果

    西田英隆, 青木恵美子, 加藤鎌司

    育種学研究   18   2016

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  • 日長反応に係わる遺伝子HvPhyCとPpd-H1がオオムギの幼穂分化や出穂特性へ及ぼす影響

    青木恵美子, 西田英隆, 塔野岡卓司, 加藤鎌司, 平将人, 柳澤貴司

    育種学研究   18   2016

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  • オオムギの2H染色体に見出された新規出穂期遺伝子のマッピング

    田部涼太, 西田英隆, 青木恵美子, 加藤鎌司

    育種学研究   17   2015

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  • 中国のコムギ在来品種におけるVrn-D4遺伝子型の再検討

    加藤鎌司, 原田英樹, 西田英隆

    育種学研究   17   2015

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  • 低温要求性遺伝子と日長反応性遺伝子が暖地におけるコムギの出穂期に及ぼす影響

    松中仁, 加藤鎌司, 西田英隆, 中村和弘, 岡見翠, 藤田雅也

    育種学研究   16   95   2014.9

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  • コムギ育種系統「超極早生」の33染色体に見出された早生遺伝子のマッピング

    山下洋士, 竹口真吉, 西田英隆, 水野信之, 新田みゆき, 藤田雅也, 那須田周平, 加藤鎌司

    育種学研究   16   93   2014.9

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  • 国内3地域におけるミサトゴールデン×ゴールデンメロンRILs集団の出穂期の変動

    西田英隆, 青木恵美子, 藤田雅也, 金古卓磨, 松中仁, 平将人, 柳沢貴司, 加藤鎌司

    育種学研究   16   95   2014.3

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  • イネDNAマーカー育種技術を活用した麦・飼料作物等イネ科新品種の開発 第2章 麦類の開発 1 出穂関連遺伝子のデザイン育種による多収オオムギ育種素材の開発

    西田英隆, 加藤鎌司, 青木恵美子, 塔野岡卓司, 吉岡藤治

    農林水産省農林水産技術会議事務局研究成果   ( 516 )   2014

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  • コムギ秋播型品種のVrn-D15’上流域及び第1イントロンにおける配列変異の解析

    高橋ひとみ, 西田英隆, 加藤鎌司

    育種学研究   15   2013

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  • RAPDおよびSSR多型に基づくスーダン在来メロンの遺伝的多様性と類縁関係

    田中克典, NHI Phan Thi Phuong, PITRAT Michel, 杉山充啓, LONG C., 西田英隆, 加藤鎌司

    育種学研究   15   2013

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  • 中国東部へのコムギの伝播と児有品種群の成立

    飯田大輔, 西田英隆, GHIMIRE Surya Kant, LONG C., 加藤鎌司

    育種学研究   15   2013

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  • コムギの日長反応性遺伝子Ppd-1が下流遺伝子TaCO1の発現パターンに及ぼす影響

    山下舞, 西田英隆, 加藤鎌司

    育種学研究   15   2013

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  • オオムギ春播性遺伝子Vrn‐H1の近傍に見出された新規日長反応性遺伝子HvPhyC

    西田英隆, 金古卓磨, 石原大輔, 川東広幸, 半田裕一, 石井誠, 最相大輔, 明石由香利, 武田和義, 加藤鎌司

    育種学研究   14   131   2012.9

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  • わが国の早生オオムギ品種を可能にしたHvPhyC-Vrn-H1遺伝子ブロック

    加藤鎌司, 土屋昌宏, 石井誠, 平将人, 青木恵美子, 柳沢貴司, 武田和義, 西田英隆

    育種学研究   14   2012

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  • オオムギ品種早木曽2号の早生遺伝子が出穂関連遺伝子の発現に及ぼす影響

    金古卓磨, 石原大輔, 石原大輔, 明石由香利, 西田英隆, 加藤鎌司

    育種学研究   14   2012

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  • コムギ系統“超極早生”がもつ劣性早生遺伝子のSSRマッピング

    川上耕平, 竹口真吉, 新田みゆき, 西田英隆, 藤田雅也, 那須田周平, 明石由香利, 加藤鎌司

    育種学研究   14   2012

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  • オオムギ品種ミサトゴールデン×ゴールデンメロンのRILs集団を用いた出穂期関連遺伝子の遺伝解析

    金古卓磨, 西田英隆, 平将人, 青木恵美子, 柳沢貴司, 加藤鎌司

    育種学研究   14   2012

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  • コムギ日長反応性遺伝子Ppd-1の配列変異が発現パターンに及ぼす影響

    田中啓二郎, 井内佑樹, 西田英隆, 加藤鎌司

    育種学研究   13   2011

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  • 四倍体ピラミダーレコムギの開花特性およびその制御遺伝子

    森山竜二, 加賀田恒, 若原浩義, 内藤実加, 桂圭祐, 齊藤大樹, 加藤鎌司, 西田英隆, 河原太八, 札埜高志, 北島宣, 中崎鉄也

    育種学研究   13   2011

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  • 日長反応性遺伝子の配列多型を利用したオオムギ出穂特性の解析

    西田英隆, 塔野岡卓司, 塔野岡卓司, 土屋昌宏, 青木恵美子, 吉岡藤治, 明石由香利, 加藤鎌司

    育種学研究   13   2011

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  • コムギ系統“超極早生”がもつ劣性早生遺伝子の連鎖SSRマーカー

    川上耕平, 新田みゆき, 西田英隆, 藤田雅也, 那須田周平, 明石由香利, 加藤鎌司

    育種学研究   13   2011

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  • キュウリミトコンドリアゲノムにおける散在型反復配列と構造多型

    小谷紗也加, 山本達也, 明石由香利, 田中克典, 西田英隆, 加藤鎌司

    育種学研究   13   2011

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  • 出穂期遺伝子の配列多型を利用したオオムギ出穂安定性の解析

    西田英隆, 土屋昌宏, 青木恵美子, 塔野岡卓司, 塔野岡卓司, 吉岡藤治, 吉岡藤治, 柳沢貴司, 加藤鎌司

    育種学研究   13   2011

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  • Wheat and Barley.

    Takeda K, Yoshino H, Enomoto T, Long C, Smekalova T, Kato K, Sato K, Tsujimoto H, Tsuyuzaki H, Tanaka H, Nishida H

    Genetic assay and study of crop germplasm in and around China (4th)   21 - 59   2010

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  • コムギ系統′′超極早生′′は少なくとも3つの劣性早生遺伝子をもつ

    川上耕平, 西田英隆, 藤田雅也, 明石由香利, 加藤鎌司

    育種学研究   12   2010

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  • メロンにおいて父性遺伝するmtIREP及びRAPDマーカーの配列解析とSTS化

    山本達也, 明石由香利, 田中克典, 吹野伸子, 松元哲, 西田英隆, 大澤良, 加藤鎌司

    育種学研究   12   2010

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  • 中国メロン“ハミウリ”における核及び細胞質ゲノムの多様性及びフユメロン品種群との類縁関係

    AIERKEN Y., 明石由香利, 田中克典, 西田英隆, 加藤鎌司

    育種学研究   12   2010

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  • ベトナム北部および中国雲南省におけるCucumis属野生種の多様性調査

    加藤鎌司, PHAN Thi Phuong Nhi, 田中克典, 山本達也, 石原大輔, 明石由香利, TRAN Thi Minh Hang, LONG C., 西田英隆

    育種学研究   12   2010

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  • コムギにおける不感光性遺伝子Ppd-A1およびPpd-B1の多様性と地理的分布

    西田英隆, 芝井哲史, 吉田哲也, 明石由香利, 加藤鎌司

    育種学研究   12   2010

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  • コムギにおける日長反応性遺伝子Ppd-1の効果と相互作用

    西田英隆, 吉田哲也, 松中仁, 明石由香利, 藤田雅也, 加藤鎌司

    育種学研究   11   2009

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  • 葉緑体ゲノムの配列多型に基づく栽培メロンの分化

    田中克典, 明石由香利, 武藤千秋, 西田英隆, KHAING May Thinn, 佐藤洋一郎, 加藤鎌司

    育種学研究   11   2009

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  • 新鮮でおいしい「ブランド・ニッポン」農産物提供のための総合研究 I系 麦類 第1編 穂発芽耐性等の機構解析と耐性系統及び制御技術の開発 第1章 穂発芽耐性等の機構解析と選抜技術及び耐性系統の開発 (1) 穂発芽耐性,早熟性の選抜技術及び高度耐性系統の開発 11115 小麦における極早生性の遺伝的解析と選抜技術の開発

    加藤鎌司, 西田英隆

    農林水産省農林水産技術会議事務局研究成果   ( 449 )   2007

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  • Phylogenetic relationship and genetic diversity among African melon and Asian melon based on RAPD

    AKASHI Y., TANAKA K., YI San San, CHOU Tin Tin, KHAING May Thinn, NISHIDA H., KATO K.

    75 ( 2 )   196 - 196   2006.9

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  • 古代中国における栽培コムギのルーツを探る 新疆ウイグル自治区小河墓遺跡出土コムギ種子のDNA解析

    西田英隆, 中村郁郎, 李軍, イディリス アブドラスル, 加藤鎌司, 佐藤洋一郎

    日本文化財科学会大会研究発表要旨集   23rd   2006

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  • Genetic control of melon seeds and seedlings by SSR marker : I. Cultivar discrimination and seed purity test

    AKASHI Y, FUKINO N, OHARA Y, RYU M, NISHIDA H, YOSHINO H, MATSUMOTO S, KATO K

    園芸学会雑誌. 別冊, 園芸学会大会研究発表   74 ( 1 )   412 - 412   2005.3

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  • Genetic diversity of nuclear and chloroplast genome in melon and the origin of cultivated melon

    KATO K., TANAKA K., AKASHI Y., YOSHINO H., NISHIDA H.

    74 ( 1 )   417 - 417   2005.3

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  • イネ出穂期遺伝子の開花前生育相に及ぼす効果の解析

    西田 英隆

    岡山大學農學部學術報告 = Scientific report of the Faculty of Agriculture, Okayama University   ( 94 )   47 - 55   2005.2

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    Language：Japanese   Publisher：岡山大學農學部  

    CiNii Article

    CiNii Books

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  • SSRマーカーを利用したメロンの種苗管理 1. 品種識別及び純度検定

    明石由香利, 吹野伸子, 小原義規, RYU M., 西田英隆, 吉野ひろ道, 松元哲, 加藤鎌司

    園芸学会雑誌 別冊   74 ( 1 )   2005

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  • イネ晩生突然変異系統に見出された基本栄養生長相増大遺伝子

    西田英隆, 中川博視, 井上博茂, 奥本裕, 谷坂隆俊

    近畿作物・育種研究   ( 46 )   81 - 85   2001.3

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    Language：Japanese  

    J-GLOBAL

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  • Identification of a mutant gene efl-m conferring an extremely long basic vegetative growth period in rice

    NISHIDA H, INOUE H, OKUMOTO Y, TANISAKA T

    育種学研究 = Breeding research   2 ( 1 )   8 - 8   2000.4

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  • Identification of an early heading time gene in the Taiwanese rice cultivar Taichung 65.

    Hiromo Inoue, Hidetaka Nishida, Yutaka Okumoto, Takatoshi Tanisaka

    Breeding Science   48 ( 2 )   103 - 108   1998

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Presentations

  • The use of a crop development model for genetic analysis of heading date in tetraploid wheat

    Nishimura K., Kawakita S., Monden Y., Kato K., Nakazaki T., Nishida H.

    The 19th Triticeae Meeting Japan  2024.12.21 

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    Event date： 2024.12.21 - 2024.12.22

    Language：Japanese   Presentation type：Poster presentation  

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  • Genetic mapping of mutant genes for heading time in barley using next-generation sequencing

    Takeda S., Okuma M., Mandozai A., Nishimura K., Monden Y., Kato K., Nishida H.

    The 19th Triticeae Meeting Japan  2024.12.21 

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    Event date： 2024.12.21 - 2024.12.22

    Language：Japanese   Presentation type：Poster presentation  

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  • Narrowing down a novel heading-time related QTL located on chromosome 4H and exploration of a causal gene in barley

    M. Okuma, K. Nishimura, Y. Monden, K. Kato, H. Nishida

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Genetic analysis of a novel heading-time QTL with small effects located on chromosome 5H in barley

    Asuka Togai, Maho Okuma, Yoshihito Atsuji, Kazusa Nishimura, Yuki Monden, Kenji Kato, Hidetaka Nishida

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Poster presentation  

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  • Genomic prediction of heading date in bread wheat using a large segregating population with loss of function of PCL1

    T. Tamura, K. Nishimura, A. Togai, Y. Monden, K. Kato, H. Nishida

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Poster presentation  

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  • GxE analysis for yields and investigation of photosynthetic activities using Japanese major sweetpotato cultivers

    M. Izumitani, K. Taguchi, K. Ishiguro, Y. Tanaka, M. Nishinaka, K. Nishimura, H. Nishida, K. Kato, Y. Monden

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Poster presentation  

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  • Effects of heading time-related genes on internode elongation and young spike development in barley

    C. Nakata, I. Nakatani, Takumi Oka, K. Nishimura, Y. Monden, K. Kato, H. Nishida

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Poster presentation  

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  • Fine mapping of hybrid incompatibility genes in tetraploid wheat using transcriptome data

    S. Nakanishi, K. Nishimura, M. Okuma, T. Nakazaki, K. Kato, Y. Monden, H. Nishida

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Poster presentation  

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  • Searching for a novel variant allele of the SSII gene that confers low-temperature gelatinization properties on sweet potato starch by amplicon sequencing of Nanopore long reads

    T. Nakahara, M. Tanaka, M. Izumitani, K.Ushijima, K. Nishimura, H. Nishida, K. Kato, Y. Monden

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Poster presentation  

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  • Genetic mapping of mutant genes for heading time in barley using next-generation sequencing

    S. Takeda, M. Okuma, A. Mandozai, K. Nishimura, Y. Monden, K. Ushijima, K. Kato, H. Nishida

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Poster presentation  

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  • Genetic quantitative analysis of a barley prostrate QTL using 3D modeling

    D. Kikkawa, K. Nishimura, Y. Monden, K. Kato, H. Nishida

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Poster presentation  

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  • Genetic analysis of the early-heading gene of a wild emmer wheat accession, KU195 using multi-environment data

    N. Takano, K. Nishimura, Y. Chang, M. Okuma, T. Nakazaki, K. Kato, Y. Monden, H. Nishida

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

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  • Fine mapping narrowed down the resistance gene to the southern root-knot nematode (Meloidogyne incognita) race SP1 in Ipomoea batatas

    S. Tanaka, M. Kurihara, H. Tabuchi, K. Nishimura, H. Nishida, K. Kato, Y. Monden

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

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  • Identification and validation of genetic loci controlling southern root-knot nematode (SP6-2) resistance utilized by CoSSA analysis

    S. Tsuchiya, M. Kurihara, H. Tabuchi, K. Nishimura, H. Nishida, K. Kato, Y. Monden

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

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  • Identification of genetic locus related to carotenoid biosynthesis of storage root of sweetpotato

    N. Horita, Y. Okada, M. Kurihara, K. Nishimura, H. Nishida, K. Kato, Y. Monden

    16th Chugoku branch meeting of Japanese Society of Breeding  2024.12.14 

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    Event date： 2024.12.14 - 2024.12.15

    Language：Japanese   Presentation type：Poster presentation  

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  • Genetic mapping of a novel early-heading QTL with small effects located on chromosome 5H in barley

    Togai A., Atsuji Y., Okuma M., Nishimura K., Monden Y., Kato K., Nishida H.

    The 146th meeting of the Japanese Society of Breeding  2024.9.20 

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    Event date： 2024.9.19 - 2024.9.20

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Estimating fruit traits QTLs in two Japanese melon landraces of Makuwa and Conomon

    Nakajima K., Shigita G., Okuma M., Ishikawa R., Nishida H., Kato K., Tanaka K.

    The 146th meeting of the Japanese Society of Breeding  2024.9.19 

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    Event date： 2024.9.19 - 2024.9.20

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Genetic analysis of heading date variation in bread wheat using a large segregating population with loss of function of PCL1

    Tamura T., Nishimura K., Togai A., Monden Y., Kato K., Nishida H.

    The 146th meeting of the Japanese Society of Breeding  2024.9.19 

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    Event date： 2024.9.19 - 2024.9.20

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Investigation of yields on various environments and photosynthetic activities using Japanese major sweetpotato cultivars

    Izumitani M., Taguchi K., Ishiguro K., Tanaka Y., Nishinaka M., Nishimura K., Nishida H., Kato K.

    The 146th meeting of the Japanese Society of Breeding  2024.9.19 

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    Event date： 2024.9.19 - 2024.9.20

    Language：Japanese   Presentation type：Poster presentation  

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  • Effect of loci related to total soluble solids in the Japanese netted melon and their origin

    Yamanaka M., Sato N., Shigita G., Okuma M., Ishikawa R., Nishida H., Kato K., Tanaka K.

    The 146th meeting of the Japanese Society of Breeding  2024.9.19 

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    Event date： 2024.9.19 - 2024.9.20

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Analysis of genetic differentiation and heading date diversity in wild emmer wheat collected from Israel

    Chang Y., Nishimura K., Kakusaka M., Murata K., Tamura T., Iwahashi Y., Motoki K., Nagasaka K., Maki T., Kinoshita Y., Nakano R., Inoue H., Monden Y., Kawaura K., Mori N., Nevo E., Kato K., Nishida H., Nakazaki T.

    The 146th meeting of the Japanese Society of Breeding  2024.9.19 

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    Event date： 2024.9.19 - 2024.9.20

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  • Development of transformation method and tissue culture system toward gene editing in sweetpotato cultivar J-Red

    Nakamura S., Izumitani M., Otani M., Matsui H., Tabuchi H., Nishimura K., Nishida H., Kato K., Monden Y.

    The 145th meeting of the Japanese Society of Breeding  2024.3.16 

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    Event date： 2024.3.17

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  • Producing transformants for identifying a yet-to-be discovered gene associated with southern root-knot nematode resistance in sweetpotato

    Izumitani M., Otani M., Nakayachi O., Tabuchi H., Nishida H., Kato K., Nishimura K., Monden Y.

    The 145th meeting of the Japanese Society of Breeding  2024.3.16 

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    Event date： 2024.3.17

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Exploration and comparative analysis of nematode resistance loci in hexaploid sweetpotato with GWAS, QTL mapping, and k-mer based bulk segregation analysis

    Kurihara M., Tabuchi H., Nishimura K., Nishida H., Kato K., Monden Y.

    The 145th meeting of the Japanese Society of Breeding  2024.3.17 

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    Event date： 2024.3.16 - 2024.3.17

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  • Mapping of genes controlling prostrate trait of barley using high-density linkage map

    Nishimura K., Okuma M., Fukushima N., Monden Y., Nishida H., Kato K.

    The 145th meeting of the Japanese Society of Breeding  2024.3.17 

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    Event date： 2024.3.16 - 2024.3.17

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Relationship of heading time-related genotype and heading-time instability in a barley RIL population

    Okuma M., Nishimura K., Monden Y., Kato K., Nishida H.

    The 145th meeting of the Japanese Society of Breeding  2024.3.17 

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    Event date： 2024.3.16 - 2024.3.17

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Mutant alleles in the SSII gene that causes low-temperature gelatinization properties of starch in sweetpotato revealed by WGS using Nanopore long reads

    Nakahara T., Kataoka I., Shimo K., Tada K., Tanaka M., Kobayashi A., Izumitani M., Naito K., Nishimura K., Nishida H., Kato K., Monden Y.

    The 145th meeting of the Japanese Society of Breeding  2024.3.17 

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    Event date： 2024.3.16 - 2024.3.17

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Identification of genetic region related to the anthocyanin accumulation in sweetpotato storage roots and sequence analysis of the candidate gene

    Horita N., Okada Y., Kanzaki H., Kurihara M., Nishimura K., Nishida H., Kato K., Monden Y.

    The 145th meeting of the Japanese Society of Breeding  2024.3.16 

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    Event date： 2024.3.16 - 2024.3.17

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Exploration of heading-time mutant genes by exome sequencing analysis in barley mutant lines

    Takeda S., Okuma M., Ibuki C., Mandozai A., Nishimura K., Monden Y., Kato K., Nishida H.

    The 145th meeting of the Japanese Society of Breeding  2024.3.17 

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    Event date： 2024.3.16

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  • オオムギの RIL 集団において検出された 3 個の出穂期関連 QTLs とその相互作用

    大熊眞歩, 西村和紗, 門田有希, 加藤鎌司, 西田英隆

    第18回ムギ類研究会  2023.12.23 

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    Event date： 2023.12.23 - 2023.12.24

    Language：Japanese   Presentation type：Poster presentation  

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  • PCL1 が機能欠損したデュラムコムギにおける出穂期変異の遺伝解析

    藤岡明雅, 大熊眞歩, 西村和紗, 門田有希, 西田英隆, 加藤鎌司

    第18回ムギ類研究会  2023.12.23 

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    Event date： 2023.12.23 - 2023.12.24

    Language：Japanese   Presentation type：Poster presentation  

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  • 四倍体コムギ 2B 染色体に座乗する種間雑種生育不全遺伝子のマッピング

    中西爽太郎, 西村和紗, 大熊眞歩, 中崎鉄也, 門田有希, 加藤鎌司, 西田英隆

    第18回ムギ類研究会  2023.12.23 

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    Event date： 2023.12.23 - 2023.12.24

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  • Analysis of growth stage specific gene expression by RNA-seq in the barley variety “Yumesakiboshi”

    C. Nakata, I. Nakatani, M. Okuma, K. Nishimura, Y. Monden, K. Kato, H. Nishida

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.24

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  • Interaction among heading time genes of durum wheat revealed by expression analysis

    A. Fujioka, Y. Monden, K. Nishimura, H. Nishida, K. Kato

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.24

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  • Development of DNA marker of Vat gene in melon, by comparative analysis of genomic sequence of Vat and nearby region

    N. Sogo, M. Okuma, O. Imoh, T. Nagai, G. Shigita, K. Tanaka, K. Nishimura, T. Seiko, C. Muto, K. Naito, Y. Monden, M. Sugiyama, H. Nishida, Y. Kawazu, N. Tomooka, K. Kato

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.24

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Application of MIG-seq to barley genetics

    K. Nishimura, M. Okuma, Y. Monden, H. Nishida, K. Kato

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.23 - 2023.9.24

    Language：Japanese   Presentation type：Poster presentation  

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  • The exploration of causal genes that affect heading time by exome-sequencing and genetic analysis of mutant genes in barley mutants

    M. Okuma, K. Nishimura, Y. Monden, K. Kato, H. Nishida

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.23 - 2023.9.24

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  • Genetic analysis of a novel QTL for heading time on chromosome 5H in barley

    Y. Atsuji, M. Okuma, K. Nishimura, Y. Monden, K. Kato, H. Nishida

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.23 - 2023.9.24

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  • Effects of heading time-related genes on young spike development and internode elongation in barley

    I. Nakatani, C. Nakata, K. Nishimura, Y. Monden, K. Kato, H. Nishida

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.23 - 2023.9.24

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  • Analysis of an intergenic interaction between the heading time-related genes HvELF3 and HvPhyC and other genes that affect the interaction in barley

    S. Itadani, K. Nishimura, Y. Monden¬¬¬, K. Kato, H. Nishida

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.23 - 2023.9.24

    Language：Japanese  

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  • Exploration of genes related to anthocyanin biosynthesis in storage root of sweetpotato

    N. Horita, Y. Okada, H. Kanzaki, M. Kurihara, K. Nishimura, H. Nishida, K. Kato, Y. Monden

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.23 - 2023.9.24

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Sequencing a candidate gene associated with resistance to the southern root-knot nematode and estimation of functional allele in sweetpotato

    M. Izumitani, S. Ohata, H. Tabuchi, K. Nishimura, H. Nishida, K. Kato, Y. Monden

    15th Chugoku branch meeting of Japanese Society of Breeding  2023.9.23 

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    Event date： 2023.9.23 - 2023.9.24

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  • デュラムコムギにおける出穂期関連遺伝子の発現解析による相互作用メカニズムの解析

    藤岡明雅, 門田有希, 西村和紗, 西田英隆, 加藤鎌司

    日本育種学会第144回講演会  2023.9.17 

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    Event date： 2023.9.16 - 2023.9.17

    Language：Japanese   Presentation type：Poster presentation  

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  • オオムギ出穂期突然変異体のエキソーム解析による原因遺伝子の探索及び遺伝解析

    大熊眞歩, 西村和紗, 門田有希, 加藤鎌司, 西田英隆

    日本育種学会第144回講演会  2023.9.17 

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    Event date： 2023.9.16 - 2023.9.17

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  • 六倍体サツマイモにおけるmultiple-doseマーカーを利用した高密度連鎖地図の構築及び線虫抵抗性に関するrandom-effect multiple QTL mapping

    栗原未結, 田淵宏朗, 加藤鎌司, 西田英隆, 門田有希

    日本育種学会第144回講演会  2023.9.16 

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    Event date： 2023.9.16 - 2023.9.17

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • トランスクリプトーム解析から見出されたサツマイモとサツマイモネコブセンチュウのせめぎ合い

    泉谷真, 大畑慎一郎, 田淵宏朗, 西田英隆, 加藤鎌司, 門田有希

    日本育種学会第144回講演会  2023.9.16 

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    Event date： 2023.9.16 - 2023.9.17

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  • メロンにおけるワタアブラムシ抵抗性遺伝子座周辺配列の比較解析および選抜マーカーの開発

    十河奈々, 大熊眞歩, Imoh Odirichi Nnennaya, 長井朋美, 鴫田玄太郎, 田中克典, 西村和紗, 清古貴, 武藤千秋, 内藤健, 門田有希, 杉山充啓, 西田英隆, 川頭洋一, 友岡憲彦, 加藤鎌司

    日本育種学会第144回講演会  2023.9.16 

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    Event date： 2023.9.16 - 2023.9.17

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • サツマイモ品種「クイックスイート」の澱粉に低温糊化性をもたらすSSII遺伝子の原因変異の解明

    片岡育哉, 志茂暉月, 多田健太郎, 田中勝, 小林晃, 泉谷真, 西田英隆, 加藤鎌司, 門田有希

    日本育種学会第143回講演会  2023.3.18 

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    Event date： 2023.3.17 - 2023.3.18

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • メロンにおける種間雑種の作出およびそのゲノム解析

    長井朋美, 鴫田玄太郎, 十河奈々, Imoh Odirichi Nnennaya, 清古貴, 武藤千秋, 内藤健, 門田有希, 田中克典, 西田英隆, 加藤鎌司

    日本育種学会第143回講演会  2023.3.18 

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    Event date： 2023.3.17 - 2023.3.18

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • オオムギ突然変異系統のエキソーム解析により見出された出穂期関連遺伝子のナンセンス変異

    大熊眞歩, 門田有希, 加藤鎌司, 西田英隆

    日本育種学会第143回講演会  2023.3.18 

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    Event date： 2023.3.17 - 2023.3.18

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • 複数の参照ゲノム配列を利用したサツマイモの収量に関わるQTLsの同定と比較解析

    堀田望未, 岡田吉弘, 栗原未結, 西田英隆, 加藤鎌司, 門田有希

    日本育種学会第143回講演会  2023.3.17 

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    Event date： 2023.3.17 - 2023.3.18

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Exome sequencing analysis toward identification of heading-time mutant genes in barley

    H. Nishida, Y. Monden, K. Kato

    2022.12.17 

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    Event date： 2022.12.16 - 2022.12.17

    Language：Japanese   Presentation type：Poster presentation  

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  • Prostrate trait of barley is a complex trait regulated by several QTLs with different functions Invited

    N. Fukushima, T. Matsuura, Y. Monden, H. Nishida, T. Hirayama, K. Kato

    2022.12.16 

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    Event date： 2022.12.16 - 2022.12.17

    Language：Japanese   Presentation type：Oral presentation (invited, special)  

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  • Exome sequencing analysis toward identification of heading-time mutant genes in barley

    H. Nishida, Y. Monden, K. Kato

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

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  • Studies on the breeding use of wild species related to melon (Cucumis melo)

    Tomomi Nagai, Odirichi Nnennaya IMOH, Katsunori Tanaka, Hidetaka Nishida, Kenji Kato

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

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  • Molecular polymorphisms reveals genetic diversity among African melon germplasms

    Imoh, O. N, Shigita, G, Dung, T. P, Tanaka, K, Nhi, P. T. P, Monden, Y, Nishida, H, Kato, K

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

    Language：Japanese   Presentation type：Poster presentation  

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  • Prostrate trait of barley is a complex trait regulated by several QTLs with different functions

    N. Fukushima, T. Matsuura, Y. Monden, H. Nishida, T. Hirayama, K. Kato

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

    Language：Japanese   Presentation type：Poster presentation  

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  • Genetic study on earliness QTLs which interact with PCL1 in durum wheat

    A. Fujioka, Y. Monden, H. Nishida, K. Kato

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

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  • Narrowing-down of the candidate region on chromosome 4H for novel heading-time QTL in barley

    M. Okuma, Y. Atsuji, K. Kato, H. Nishida

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

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  • Analysis of interactions among three heading-time related genes HvELF3, HvPhyC, and Ppd-H1 in barley

    S. Itadani, K. Kato, H. Nishida

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

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  • Effects of heading time genes on floral transition and reproductive development in barley

    C. Nakata, K. Kato, H. Nishida

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

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  • Identification of quantitative trait loci controlling the resistance to multiple races of southern root-knot nematode derived from sweetpotato cultivar ‘JRed’ and development of DNA marker for resistance selection

    M. Kurihara, H. Tabuchi, K. Shirasawa, S. Isobe, H. Nishida, K. Kato, Y. Monden

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

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  • Loss-of-function mutations in the SSII gene confers low pasting temperature in sweetpotato starch

    I. Kataoka, K. Shimo, K. Tada, M. Tanaka, A. Kobayashi, H. Nishida, K. Kato, Y. Monden

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

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  • Identification of genomic regions controlling yield in sweetpotato using genomewide association study for polylploid species

    N. Horita, Y. Okada, M. Kurihara, H. Nishida, K. Kato, Y. Monden

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.11 

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    Event date： 2022.12.10 - 2022.12.11

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  • Molecular Phylogenetics of Cucumis genus based on diversity analysis of chloroplast genome

    N. Sogo, M. Okuma, O. Imoh, T. Nagai, T. Seiko, M. Chiaki, K. Naito, Monden, M. Sugiyama, G. Shigita, K. Tanaka, H. Nishida, Y. Kawazu, N. Tomooka, K. Kato

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.10 

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    Event date： 2022.12.10 - 2022.12.11

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Unraveling the competition between sweetpotato and southern root knot nematode by transcriptome analysis

    M. Izumitani, S. Ohata, H. Tabuchi, H. Nishida, K. Kato, Y. Monden

    14th Chugoku branch meeting of Japanese Society of Breeding  2022.12.10 

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    Event date： 2022.12.10 - 2022.12.11

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • The exploration of novel alleles affect heading time by exome-sequencing of barley mutants

    M. Okuma, K. Nishimura, Y. Monden, K. Kato, H. Nishida

    3rd Barley Mutant Conference  2023.10.9 

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    Event date： 2022.10.9 - 2022.10.10

    Language：English   Presentation type：Poster presentation  

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  • Identificdation of QTLs controlling the resistance to multiple races of southern root-knot nematode and development of DNA markers for resistance selection

    M. Kurihara, H. Tabuchi, K. Shirasawa, H. Nishida, K. Kato, Y. Monden

    142nd Meeting of Japanese Society of Breeding  2022.9.24 

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    Event date： 2022.9.23 - 2022.9.24

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Prostrate trait of barley is a comples trait regulated by several QTLs with different functions

    N. Fukushima, T. Matsuura, Y. Monden, H. Nishida, T. Hirayama, K. Kato

    142nd Meeting of Japanese Society of Breeding  2022.9.24 

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    Event date： 2022.9.23 - 2022.9.24

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Sequence mutations in the cis-regulatory elements of a candidate gene controlling southern root knot nematode resistance in sweet potato

    M. Izumitani, S. Ohata, H. Tabuchi, H. Nishida, K. Kato, Y. Monden

    142nd Meeting of Japanese Society of Breeding  2022.9.24 

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    Event date： 2022.9.23 - 2022.9.24

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  • Genetic study on earliness QTLs which interact with PCL1 in durum wheat

    A. Fujioka, Y. Monden, H. Nishida, K. Kato

    142nd Meeting of Japanese Society of Breeding  2022.9.24 

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    Event date： 2022.9.23 - 2022.9.24

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Molecular phylogenetics of melon based on diversity analysis of chloroplast genome

    N. Sogo, M. Okuma, O. Imoh, T. Nagai, T. Seiko, C. Muto, K. Naito, Y. Monden, M. Sugiyama, G. Shigita, K. Tanaka, H. Nishida, Y. Kawazu, N. Tomooka, K. Kato

    142nd Meeting of Japanese Society of Breeding  2022.9.23 

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    Event date： 2022.9.23 - 2022.9.24

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  • Characterization of melon accessions collected from the Maldives

    N. Sogo, O. Imoh, T. Nagai, G. Shigita, K. Tanaka, H. Nishida, K. Kato

    141st Meeting of Japanese Society of Breeding  2022.3.21 

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    Event date： 2022.3.20 - 2022.3.21

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  • Phylogenetic analysis of Cucumis species inferred from their genome size

    T. Nagai, G. Shigita, N. Sogo, O. Imoh, K. Tanaka, H. Nishida, K. Kato

    141st Meeting of Japanese Society of Breeding  2022.3.21 

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    Event date： 2022.3.20 - 2022.3.21

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  • Southeast Asia is rich in melon landraces harboring resistant allele of MeVat gene for cotton aphid resistance

    O. Imoh, T. Dung, M. Pervin, K. Tanaka, G. Shigita, H. Nishida, K. Kato

    141st Meeting of Japanese Society of Breeding  2022.3.21 

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    Event date： 2022.3.20 - 2022.3.21

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  • Estimating quantitative trait loci and QTL analysis related fruit traits in Japanese netted melon

    N. Sato, Y. Akashi, R. Ishikawa, K. Tanaka, H. Nishida, K. Kato

    141st Meeting of Japanese Society of Breeding  2022.3.20 

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    Event date： 2022.3.20 - 2022.3.21

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  • PCL1 is causal gene for early and extra early mutations in the pedigree of wheat cultivar "Blackhull"

    A. Fujioka, N. Sogo, T. Nishina, K. Murata, K. Shimizu, H. Nishida, S. Nasuda, K. Kato

    141st Meeting of Japanese Society of Breeding  2022.3.20 

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    Event date： 2022.3.20 - 2022.3.21

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  • Genetic analysis of novel QTLs for heading time on chromosomes 4H and 5H in barley

    M. Okuma, Y. Atsuji, K. Kato, H. Nishida

    141st Meeting of Japanese Society of Breeding  2022.3.20 

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    Event date： 2022.3.20 - 2022.3.21

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  • コムギ日長反応性遺伝子Ppd-B1の新規配列変異の早生化効果

    加藤鎌司, 西田英隆

    日本育種学会 第140回講演会  2021.9.23 

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    Event date： 2021.9.23 - 2021.9.25

    Language：Japanese   Presentation type：Oral presentation (general)  

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  • Southeast Asia is rich in melon landraces resistant to Melon Necrotic Spot Virus (MNSV)

    Imoh ON, Dung TP, Pervin MN, 鴫田玄太郎, 田中克典, 西田英隆, 加藤鎌司

    日本育種学会 第139回講演会  2021.3.21 

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    Event date： 2021.3.19 - 2021.3.21

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  • 葉緑体ゲノムの配列変異解析が示すメロンの近縁野生種

    長井朋美, 丸山純, 田中克典, 鴫田玄太郎, Imoh Odirichi Nnennaya, 西田英隆, 加藤鎌司

    日本育種学会 第139回講演会  2021.3.21 

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    Event date： 2021.3.19 - 2021.3.21

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  • ジョージアで収集したタルホコムギ遺伝資源の遺伝的多様性

    笹沼恒男, 平田ありさ, 西田英隆, Zezua Asanidze・Tamar Bragvadze・Olga N. Kovaleva, Tamara, N. Smekalova

    日本育種学会 第139回講演会  2021.3.21 

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    Event date： 2021.3.19 - 2021.3.21

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  • HvELF3及びHvPhyCがオオムギの圃場出穂日に及ぼす効果

    矢島沙織, 加藤鎌司, 西田英隆

    日本育種学会 第139回講演会  2021.3.19 

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    Event date： 2021.3.19 - 2021.3.21

    Language：Japanese  

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Awards

  • Japanese Society of Breeding Best Paper Awards

    2024.9   Japanese Society of Breeding   Elucidation of genetic variation and ppopulation structure of melon genetic resources in the NARO Genbank, and construction of the World Melon Core Collection

    Shigita G., Dung TP, Pervin MN, Duong TT, Imoh ON, Monden Y., Nishida H., Tanaka K., Sugiyama M., Kawazu Y., Tomooka N., Kato K.

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  • Japanese Society of Breeding Best Paper Awards

    2014.3   Japanese Society of Breeding  

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Research Projects

  • オオムギにおける茎葉空間配置の環境応答に関する遺伝機構の解明

    Grant number：22K05585  2022.04 - 2025.03

    日本学術振興会  科学研究費助成事業 基盤研究(C)  基盤研究(C)

    西田 英隆, 加藤 鎌司

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    Grant amount：\4160000 （ Direct expense: \3200000 、 Indirect expense：\960000 ）

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  • フィールド・マルチオミックス解析によるムギ類出穂期不安定性の遺伝学的研究

    Grant number：22H02314  2022.04 - 2025.03

    日本学術振興会  科学研究費助成事業 基盤研究(B)  基盤研究(B)

    加藤 鎌司, 西田 英隆, 塔野岡 卓司, 松山 宏美, 高橋 飛鳥, 島崎 由美, 牧 夏海

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    Grant amount：\17290000 （ Direct expense: \13300000 、 Indirect expense：\3990000 ）

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  • Molecular genetic study on heading time instability in wheat and barley

    Grant number：19H02931  2019.04 - 2022.03

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

    KATO Kenji

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    Grant amount：\17290000 （ Direct expense: \13300000 、 Indirect expense：\3990000 ）

    Heading time is one of the important traits to stably achieve the maximum yield in wheat and barley, but is becoming unstable mainly due to yearly fluctuation of temperature throughout the growing season. In this study, we studied the effect of wheat PCL1 genes and barley PhyC and Ppd-1 genes on heading time and its yearly fluctuation (instability). In wheat, heading was accelerated ca. two weeks and became instable when functional allele of PCL1 was absent, that is, recessive homozygote at three homoeologous loci. In contrast, in plants having at least one functional allele, earliness effect was just a few days. The similar results were also obtained in durum wheat lines developed by introduction of non-functional allele of PCL1 from 'Chogokuwase'. We also identified that additional earliness gene(s) are located on chromosomes 1B, 6A and 6B. In barley, the effect of PhyC and Ppd-H1 on heading time and its instability.

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  • Genetic analysis of heading time unstability in wheat and barley

    Grant number：16H04863  2016.04 - 2019.03

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)  Grant-in-Aid for Scientific Research (B)

    KATO Kenji

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    Grant amount：\16900000 （ Direct expense: \13000000 、 Indirect expense：\3900000 ）

    Growth and yield of crops are significantly affected by changing global environment. Heading time is one of the important traits to achieve the maximum yield in wheat and barley, but is becoming unstable mainly due to yearly fulctuation of temperature throughout the growing season. In this study, we first identified wheat and barley cultivars whose heading time varies largely depending on the year, and then identified the causal gene(s). A wheat breeding line 'Chogokuwase' is an extra early heading line and its heading date is accelerated by warmer temperature in wheat. By map based approach, using segregating populations derived from 'Chogokuwase' x 'Kinuiroha', we identified that the causal gene is PCL1 and triple recessive homozygote become eatra early heading. In barley, HvPhyC mutant allele, which is commonly found in the Japanese early maturity cultivars, proved to cause unstability of heading time depending on the temperature condition during winter.

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  • Map-based cloning and function analysis of a wheat vernalization gene Vrn-D4

    Grant number：26450005  2014.04 - 2017.03

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C)  Grant-in-Aid for Scientific Research (C)

    Nishida Hidetaka, KATO Kenji, DUBCOVSKY Jorge, KIPPES Nestor

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    Authorship：Principal investigator  Grant type：Competitive

    Grant amount：\5070000 （ Direct expense: \3900000 、 Indirect expense：\1170000 ）

    In the previous study, a wheat vernalization gene Vrn-D4 was mapped in a centromeric region, 0.09cM interval, of chromosome 5D. In this study, Vrn-D4 was found to be located on the short arm. This new information narrowed further down the Vrn-D4 region. In another analysis, the line with a spring allele Vrn-D4 was found to carry two copies of Vrn-A1, one of which was located on the short arm of chromosome 5D and had specific polymorphisms. Other lines with a spring allele Vrn-D4 also had this Vrn-A1 copy, which confirmed that the causal gene of Vrn-D4 is the Vrn-A1 copy on the short arm of chromosome 5D. Moreover, origin of Vrn-D4 was analyzed.

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  • Genetic assay and study of crop germplasm introduced/originated in East Asia (2nd)

    Grant number：26257409  2014.04 - 2017.03

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (A)  Grant-in-Aid for Scientific Research (A)

    Kenji Kato

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    Grant amount：\33540000 （ Direct expense: \25800000 、 Indirect expense：\7740000 ）

    Plant genetic resources of important crops, including barley, wheat, soybean and melon, have been explored in Asian countries through which crops were introduced to East Asia. Based on the international network constructed by our research group, we successfully conducted a total of twenty-one times of field expedition. In addition, we performed joint experiments with our counterpart scientists in respective countries, when international transfer of genetic resources was difficult. Several important new findings related with the evolution, transmission, adaptation of these crops have been obtained by the analysis of diverse plant genetic resources, and published in scientific papers and books. We also evaluated the agronomically important traits of these materials introduced which can be utilized in breeding program of each crop, as well as for basic research to identify novel genes.

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  • Cloning of wheat vernalization gene Vrn-D4 and its functional analysis

    Grant number：23780005  2011.05 - 2013

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists (B)  Grant-in-Aid for Young Scientists (B)

    NISHIDA Hidetaka

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    Authorship：Principal investigator  Grant type：Competitive

    Grant amount：\4550000 （ Direct expense: \3500000 、 Indirect expense：\1050000 ）

    To dissect the wheat vernalization mechanism, molecular cloning of all vernalization genes and their functional analyses need to be conducted. In this study, we focused on the vernalization gene Vrn-D4. We constructed the high density genetic map around the Vrn-D4 locus, which narrowed down the Vrn-D4 region to the 0.09cM interval. By referring the genomic information on the Brachypodium corresponding region, we selected Vrn-D4 candidate genes. However, no significant variation was found.

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  • Genetic assay and study of crop germplasm introduced/originated in East Asia

    Grant number：23255007  2011.04 - 2014.03

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (A)  Grant-in-Aid for Scientific Research (A)

    KATO Kenji, SATO Kazuhiro, TSUJIMOTO Hisashi, TSUYUZAKI Hiroshi, ENOMOTO Takashi, TANAKA Hiroyuki, NISHIDA Hidetaka, ABE Jun, SASANUMA Tsuneo, KASHIWAGI Jun-ichi, KISHII Masahiro, TANAKA Katsunori, HISANO Hiroshi, SAISHO Daisuke

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    Grant amount：\38090000 （ Direct expense: \29300000 、 Indirect expense：\8790000 ）

    Plant genetic resources of important crops, including barley, wheat, soybean and melon, have been explored in Asian countries through which crops were introduced to East Asia, and successfully introduced through a total of twelve times of field expedition. Several important new findings related with the evolution, transmission, adaptation of these crops have been obtained by the analysis of diverse plant genetic resources, and published in scientific papers and books. We also identified several accessions which can be used for the improvement of agronomically important traits. Such novel resources can be utilized in breeding program of each crop, as well as for basic research to identify novel genes.

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  • Clarification of desertification process of Xiaohe Heritage, the Uighur Autonomous Region, China, through inter-disciplinary studies

    Grant number：22300311  2010 - 2012

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)  Grant-in-Aid for Scientific Research (B)

    SATO Yo-ichiro, ITO Toshio, KATO Kenji, KAWAHARA Taihachi, FUJIOKA Toshio, MNNEN Hideyuki, KURATA Takashi, NISHIDA Hidetaka, HOSOYA Aoi

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    Grant amount：\18200000 （ Direct expense: \14000000 、 Indirect expense：\4200000 ）

    An idea of new geologic chronological term "Anthropocene" has proposed by Crutzen (2000) that a large impact that human activities have had on the global environment thanks to the rapid consumption of energy from the industrial revolution onwards. However, we now understand from careful studies of environmental history that the impact of human activities was far greater than could have been imagined from long before the industrial revolution occurred.

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  • Cloning of Vrn-D5 for spring growth habit in wheat

    Grant number：20780002  2008.05 - 2010

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists (B)  Grant-in-Aid for Young Scientists (B)

    NISHIDA Hidetaka

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    Authorship：Principal investigator  Grant type：Competitive

    Grant amount：\4160000 （ Direct expense: \3200000 、 Indirect expense：\960000 ）

    High density mapping of Vrn-D5 (renamed to Vrn-D4), one of the vernalization genes that determines the growth habit of wheat, was attemped in this study. As the result, Vrn-D4 was mapped on the 1.8cM region between the SSR markers Xcfd78 and Xbarc205 that were located on the centromeric region of chromosome 5D, and cosegregated with Xcfd67 and EST marker XBG313707. These markers were considered useful for marker assisted selection in the future breeding program.

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  • Genetic assay and study of crop germplasm in and around China (4th)

    Grant number：19255009  2007 - 2009

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (A)  Grant-in-Aid for Scientific Research (A)

    TAKEDA Kazuyoshi, SATO Kazuhiro, ENOMOTO Takashi, KATO Kenji, NISHIDA Hidetaka, TSUJIMOTO Hisashi, TANAKA Hiroyuki, TSUYUZAKI Hiroshi, ABE Jun, KANAZAWA Akira, UMEMOTO Shinya

    　 More details

    Grant amount：\26650000 （ Direct expense: \20500000 、 Indirect expense：\6150000 ）

    Plant genetic resources of important crops, including barley, wheat, soybean and melon, have been explored in and around China and successfully introduced through a total of twelve times of field expedition. Several important new findings related with the evolution, transmission, adaptation of these crops have been obtained by the analysis of diverse plant genetic resources, and published by scientific papers and books. We also identified several accessions which can be used for the improvement of agronomical traits. Such novel resources will be utilized in breeding program of each crop, as well as for basic research to identify novel genes.

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  • Crop Genetics and Breeding （2024academic year） Second semester  - 火5～6

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Social Activities

  • 令和3年度岡山県教育委員会免許法認定講習

    Role(s)：Lecturer

    岡山県  令和3年度岡山県教育委員会免許法認定講習  2021.8.26 - 2021.8.27

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    Type：Certification seminar

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