Faculty Profiles - MORITA Mizuki

Papers - MORITA Mizuki

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Effects of Sampling Frequency on Human Activity Recognition with Machine Learning Aiming at Clinical Applications Reviewed International journal

Takahiro Yamane, Moeka Kimura, Mizuki Morita

Sensors 25 ( 12 ) 3780 - 3780 2025.6

Authorship：Last author,　Corresponding author Language：English Publishing type：Research paper (scientific journal) Publisher：MDPI AG

Human activity recognition using wearable accelerometer data can be a useful digital biomarker for severity assessment and the diagnosis of diseases, where the relationship between onset and patient activity is crucial. For long-term monitoring in clinical settings, the volume of data collected over time should be minimized to reduce power consumption, computational load, and communication volume. This study aimed to determine the lowest sampling frequency that maintains recognition accuracy for each activity. Thirty healthy participants wore nine-axis accelerometer sensors at five body locations and performed nine activities. Machine-learning-based activity recognition was conducted using data sampled at 100, 50, 25, 20, 10, and 1 Hz. Data from the non-dominant wrist and chest, which have previously shown high recognition accuracy, were used. Reducing the sampling frequency to 10 Hz did not significantly affect the recognition accuracy for either location. However, lowering the frequency to 1 Hz decreases the accuracy of many activities, particularly brushing teeth. Using data with a 10 Hz sampling frequency can maintain recognition accuracy while decreasing data volume, enabling long-term patient monitoring and device miniaturization for clinical applications.

DOI： 10.3390/s25123780

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DNA Degradation in FFPE Tissue Samples Caused by Air Transport: An Experimental Evaluation of Radiation Exposure Reviewed International journal

Rio Yamaguchi, Takahiro Yamane, Masahiro Oita, Hirofumi Inoue, Mizuki Morita

Pathology International 2025.6

Impact of Sensor-Axis Combinations on Machine Learning Accuracy for Human Activity Recognition Using Accelerometer Data in Clinical Settings Reviewed International journal

Takahiro Yamane, Moeka Kimura, Mizuki Morita

Physical Activity and Health 9 ( 1 ) 95 - 109 2025.5

Authorship：Last author,　Corresponding author Language：English Publishing type：Research paper (scientific journal) Publisher：Ubiquity Press, Ltd.

Background: Identifying patient activity during symptom onset is crucial in conditions such as chronic obstructive pulmonary disease (COPD) or arrhythmia. Accelerometer data can aid in this process; however, minimal data requirements are preferable. This study aimed to determine the minimum number of axes required to accurately recognize activities related to COPD or arrhythmia.Methods: Thirty healthy participants wore a 9-axis accelerometer in five positions and performed nine activities. Machine learning-based activity recognition was conducted using 9-, 6-, and 3-axis data from the nondominant wrist or chest, as these two positions demonstrated high recognition accuracy in our previous study.Results: For the nondominant wrist, the accuracy of recognizing activities such as lying in the supine position, standing, eating, and running was comparable for the 3-axis acceleration and 9-axis data. For the chest, the accuracy of recognizing activities such as lying in the supine position, standing, sitting, using the restroom, and ascending or descending stairs was comparable for 6-axis (combined acceleration and magnetometer) and 9-axis data.Conclusions: The findings suggest that 3-axis acceleration data for the nondominant wrist and 6-axis combined acceleration and magnetometer data for the chest lead to high activity recognition accuracy.

DOI： 10.5334/paah.441

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Clinical-level screening of sleep apnea syndrome with single-lead ECG alone is achievable using machine learning with appropriate time windows Reviewed International journal

Takahiro Yamane, Masanori Fujii, Mizuki Morita

Sleep and Breathing 29 ( 2 ) 156 2025.4

Authorship：Last author,　Corresponding author Language：English Publishing type：Research paper (scientific journal) Publisher：Springer Science and Business Media LLC

Purpose: To establish a simple and noninvasive screening test for sleep apnea (SA) that imposes less burden on potential patients. The specific objective of this study was to verify the effectiveness of past and future single-lead electrocardiogram (ECG) data from SA occurrence sites in improving the estimation accuracy of SA and sleep apnea syndrome (SAS) using machine learning.
Methods: The Apnea-ECG dataset comprising 70 ECG recordings was used to construct various machine-learning models. The time window size was adjusted based on the accuracy of SA detection, and the performance of SA detection and SAS diagnosis (apnea‒hypopnea index ≥ 5 was considered SAS) was compared.
Results: Using ECG data from a few minutes before and after the occurrence of SAs improved the estimation accuracy of SA and SAS in all machine learning models. The optimal range of the time window and achieved accuracy for SAS varied by model; however, the sensitivity ranged from 95.7 to 100%, and the specificity ranged from 91.7 to 100%.
Conclusions: ECG data from a few minutes before and after SA occurrence were effective in SA detection and SAS diagnosis, confirming that SA is a continuous phenomenon and that SA affects heart function over a few minutes before and after SA occurrence. Screening tests for SAS, using data obtained from single-lead ECGs with appropriate past and future time windows, should be performed with clinical-level accuracy.

DOI： 10.1007/s11325-025-03316-0

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Other Link： https://link.springer.com/article/10.1007/s11325-025-03316-0/fulltext.html

Application of Nine-Axis Accelerometer-Based Recognition of Daily Activities in Clinical Examination Reviewed International journal

Takahiro Yamane, Moeka Kimura, Mizuki Morita

Physical Activity and Health 8 ( 1 ) 29 - 46 2024.3

Tri-Axial Accelerometer-Based Recognition of Daily Activities Causing Shortness of Breath in COPD Patients Reviewed International journal

Takahiro Yamane, Yuu Yamasaki, Wakana Nakashima, Mizuki Morita

Physical Activity and Health 7 ( 1 ) 64 - 75 2023.2

Trial of sportswear type ECG sensor device for cardiac safety management during marathon running Reviewed International journal

Takahiro Yamane, Kazuya Hirano, Kenta Hirai, Daiki Ousaka, Noriko Sakano, Mizuki Morita, Susumu Oozawa, Shingo Kasahara

Advanced Biomedical Engineering 11 151 - 161 2022.8

Initial evaluation of a novel electrocardiography sensor-embedded fabric wear during a full marathon Reviewed International journal

Daiki Ousaka, Kenta Hirai, Noriko Sakano, Mizuki Morita, Madoka Haruna, Kazuya Hirano, Takahiro Yamane, Akira Teraoka, Kazuo Sanou, Susumu Oozawa, Shingo Kasahara

Heart and Vessels 37 ( 3 ) 443 - 450 2022.3

Language：English Publishing type：Research paper (scientific journal)

Sudden cardiac accident (SCA) during a marathon is a concern due to the popularity of the sport. Preventive strategies, such as cardiac screening and deployment of automated external defibrillators have controversial cost-effectiveness. We investigated the feasibility of use of a new electrocardiography (ECG) sensor-embedded fabric wear (SFW) during a marathon as a novel preventive strategy against SCA. Twenty healthy volunteers participated in a full marathon race. They were equipped with a SFW hitoe® with a transmitter connected via Bluetooth to a standard smartphone for continuous ECG recording. All data were stored in a smartphone and used to analyze the data acquisition rate. The adequate data acquisition rate was > 90% in 13, 30-90% in 3, and < 10% in 4 runners. All of 4 runners with poorly recorded data were female. Inadequate data acquisition was significantly associated with the early phase of the race compared with the mid phase (P = 0.007). Except for 3 runners with poor heart rate data, automated software calculation was significantly associated with manual analysis for both the mean (P < 0.001) and maximum (P = 0.014) heart rate. We tested the feasibility of continuously recording cardiac data during a marathon using a new ECG sensor-embedded wearable device. Although data from 65% of runners were adequately recorded, female runners and the early phase of the race tended to have poor data acquisition. Further improvements in device ergonomics and software are necessary to improve ability to detect abnormal ECGs that may precede SCA.

DOI： 10.1007/s00380-021-01939-3

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Multiple cancer type classification by small RNA expression profiles with plasma samples from multiple facilities Reviewed International journal

Kuno Suzuki, Hideyoshi Igata, Motoki Abe, Yusuke Yamamoto, small RNA based cancer classification project

Cancer Science 113 ( 6 ) 2144 - 2166 2022.2

Predicting Anesthetic Infusion Events Using Machine Learning Reviewed International journal

Naoki Miyaguchi, Koh Takeuchi, Hisashi Kashima, Mizuki Morita, Hiroshi Morimatsu

Scientific Reports 11 ( 1 ) 23648 - 23648 2021.11

Language：English Publishing type：Research paper (scientific journal)

Recently, research has been conducted to automatically control anesthesia using machine learning, with the aim of alleviating the shortage of anesthesiologists. In this study, we address the problem of predicting decisions made by anesthesiologists during surgery using machine learning; specifically, we formulate a decision making problem by increasing the flow rate at each time point in the continuous administration of analgesic remifentanil as a supervised binary classification problem. The experiments were conducted to evaluate the prediction performance using six machine learning models: logistic regression, support vector machine, random forest, LightGBM, artificial neural network, and long short-term memory (LSTM), using 210 case data collected during actual surgeries. The results demonstrated that when predicting the future increase in flow rate of remifentanil after 1 min, the model using LSTM was able to predict with scores of 0.659 for sensitivity, 0.732 for specificity, and 0.753 for ROC-AUC; this demonstrates the potential to predict the decisions made by anesthesiologists using machine learning. Furthermore, we examined the importance and contribution of the features of each model using Shapley additive explanations-a method for interpreting predictions made by machine learning models. The trends indicated by the results were partially consistent with known clinical findings.

DOI： 10.1038/s41598-021-03112-2

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The Data Use Ontology to streamline responsible access to human biomedical datasets Reviewed International coauthorship International journal

Jonathan Lawson, Moran N. Cabili, Giselle Kerry, Tiffany Boughtwood, Adrian Thorogood, Pinar Alper, Sarion R. Bowers, Rebecca R. Boyles, Anthony J. Brookes, Matthew Brush, Tony Burdett, Hayley Clissold, Stacey Donnelly, Stephanie O.M. Dyke, Mallory A. Freeberg, Melissa A. Haendel, Chihiro Hata, Petr Holub, Francis Jeanson, Aina Jene, Minae Kawashima, Shuichi Kawashima, Melissa Konopko, Irene Kyomugisha, Haoyuan Li, Mikael Linden, Laura Lyman Rodriguez, Mizuki Morita, Nicola Mulder, Jean Muller, Satoshi Nagaie, Jamal Nasir, Soichi Ogishima, Vivian Ota Wang, Laura D. Paglione, Ravi N. Pandya, Helen Parkinson, Anthony A. Philippakis, Fabian Prasser, Jordi Rambla, Kathy Reinold, Gregory A. Rushton, Andrea Saltzman, Gary Saunders, Heidi J. Sofia, John D. Spalding, Morris A. Swertz, Ilia Tulchinsky, Esther J. van Enckevort, Susheel Varma, Craig Voisin, Natsuko Yamamoto, Chisato Yamasaki, Lyndon Zass, Jaime M. Guidry Auvil, Tommi H. Nyrönen, Mélanie Courtot

Cell Genomics 1 ( 2 ) 100028 - 100028 2021.11

Simple Wearable Device to Reduce Stress When Delivering a Speech without Pre-Training Reviewed International journal

Takahiro Yamane, Yuma Nakadoi, Mina Takagi, Mizuki Morita

Healthcare Informatics Research 27 ( 3 ) 231 - 240 2021.7

Rolling stockpile of medical supplies for pandemic preparedness: modeling and simulation Reviewed

Mizuki Morita

Interdisciplinary Science 1 17 - 20 2021.3

Authorship：Lead author,　Last author,　Corresponding author Language：Japanese Publishing type：Research paper (bulletin of university, research institution)

When a global pandemic of infectious diseases occurs, demand for medical supplies such as masks, disinfectants, and personal protective equipment will exceed the production capacity in normal times, consequently leading to serious shortages. Stockpiling is necessary to prepare for such situations. However, because pandemics are infrequent and might occur at any time, stockpile freshness is an important concern. As described in this paper, a “rolling stockpile” of medical supplies is proposed to prevent the medical supply stockpile from becoming too old. A formulation of a model and simulations based on it is presented. Results demonstrate that the method is applicable to the design of warehouses for rolling stockpiles, monitoring stockpile depletion during emergencies, and monitoring the process of recovery from emergencies.

DOI： 10.18926/interdisciplinary/61886

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Information and communication technology equipment and services for remote monitoring and health management: Survey of services and their classification for use in home care nursing Reviewed

Toshio Sakamoto, Akina Hirata, Mizuki Morita

Interdisciplinary Science 1 47 - 63 2021.3

De-identifying free text of Japanese electronic health records Reviewed International journal

Kohei Kajiyama, Hiromasa Horiguchi, Takashi Okumura, Mizuki Morita, Yoshinobu Kano

Journal of Biomedical Semantics 11 ( 1 ) 11 - 11 2020.9

Language：English Publishing type：Research paper (scientific journal)

BACKGROUND: Recently, more electronic data sources are becoming available in the healthcare domain. Electronic health records (EHRs), with their vast amounts of potentially available data, can greatly improve healthcare. Although EHR de-identification is necessary to protect personal information, automatic de-identification of Japanese language EHRs has not been studied sufficiently. This study was conducted to raise de-identification performance for Japanese EHRs through classic machine learning, deep learning, and rule-based methods, depending on the dataset. RESULTS: Using three datasets, we implemented de-identification systems for Japanese EHRs and compared the de-identification performances found for rule-based, Conditional Random Fields (CRF), and Long-Short Term Memory (LSTM)-based methods. Gold standard tags for de-identification are annotated manually for age, hospital, person, sex, and time. We used different combinations of our datasets to train and evaluate our three methods. Our best F1-scores were 84.23, 68.19, and 81.67 points, respectively, for evaluations of the MedNLP dataset, a dummy EHR dataset that was virtually written by a medical doctor, and a Pathology Report dataset. Our LSTM-based method was the best performing, except for the MedNLP dataset. The rule-based method was best for the MedNLP dataset. The LSTM-based method achieved a good score of 83.07 points for this MedNLP dataset, which differs by 1.16 points from the best score obtained using the rule-based method. Results suggest that LSTM adapted well to different characteristics of our datasets. Our LSTM-based method performed better than our CRF-based method, yielding a 7.41 point F1-score, when applied to our Pathology Report dataset. This report is the first of study applying this LSTM-based method to any de-identification task of a Japanese EHR. CONCLUSIONS: Our LSTM-based machine learning method was able to extract named entities to be de-identified with better performance, in general, than that of our rule-based methods. However, machine learning methods are inadequate for processing expressions with low occurrence. Our future work will specifically examine the combination of LSTM and rule-based methods to achieve better performance. Our currently achieved level of performance is sufficiently higher than that of publicly available Japanese de-identification tools. Therefore, our system will be applied to actual de-identification tasks in hospitals.

DOI： 10.1186/s13326-020-00227-9

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DV200 index for assessing RNA integrity in next-generation sequencing Reviewed International journal

Takehiro Matsubara, Junichi Soh, Mizuki Morita, Takahiro Uwabo, Shuta Tomida, Toshiyoshi Fujiwara, Susumu Kanazawa, Shinichi Toyooka, Akira Hirasawa

BioMed Research International 2020 9349132 2020.2

Language：English Publishing type：Research paper (scientific journal) Publisher：Hindawi

Poor quality of biological samples will result in an inaccurate analysis of next-generation sequencing (NGS). Therefore, methods to accurately evaluate sample integrity are needed. Among methods for evaluating RNA quality, the RNA integrity number equivalent (RINe) is widely used, whereas the DV200, which evaluates the percentage of fragments of >200 nucleotides, is also used as a quality assessment standard. In this study, we compared the RINe and DV200 RNA quality indexes to determine the most suitable RNA index for the NGS analysis. Seventy-one RNA samples were extracted from formalin-fixed paraffin-embedded tissue samples (n = 30), fresh-frozen samples (n = 25), or cell lines (n = 16). After assessing RNA quality using the RINe and DV200, we prepared two kinds of stranded mRNA sequencing libraries. Finally, we calculated the correlation between each RNA quality index and the amount of library product (1st PCR product per input RNA). The DV200 measure showed stronger correlation with the amount of library product than the RINe (R 2 = 0.8208 for the DV200 versus 0.6927 for the RINe). Receiver operating characteristic curve analyses revealed that the DV200 was the better marker for predicting efficient library production than the RINe using a threshold of >10 ng/ng for the amount of the 1st PCR product per input RNA (cutoff value for the RINe and DV200, 2.3 and 66.1%; area under the curve, 0.99 and 0.91; sensitivity, 82% and 92%; and specificity, 93% and 100%, respectively). Our results indicate that NGS libraries prepared using RNA samples with the DV200 value > 66.1% exhibit greater sensitivity and specificity than those prepared with the RINe values > 2.3. These findings suggest that the DV200 is superior to the RINe, especially for low-quality RNA, because it is a more consistent assessment of the amount of the 1st NGS library product per input.

DOI： 10.1155/2020/9349132

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Search for Therapeutic Agents for Cardiac Arrest Using a Drug Discovery Tool and Large-Scale Medical Information Database Reviewed International journal

Yoshito Zamami, Takahiro Niimura, Toshihiro Koyama, Yuta Shigemi, Yuki Izawa-Ishizawa, Mizuki Morita, Ayako Ohshima, Keisaku Harada, Toru Imai, Hiromi Hagiwara, Naoto Okada, Mitsuhiro Goda, Kenshi Takechi, Masayuki Chuma, Yutaka Kondo, Koichiro Tsuchiya, Shiro Hinotsu, Mitsunobu R Kano, Keisuke Ishizawa

Frontiers in pharmacology 10 1257 - 1257 2019.11

Language：English Publishing type：Research paper (scientific journal)

The survival rate of cardiac arrest patients is less than 10%; therefore, development of a therapeutic strategy that improves their prognosis is necessary. Herein, we searched data collected from medical facilities throughout Japan for drugs that improve the survival rate of cardiac arrest patients. Candidate drugs, which could improve the prognosis of cardiac arrest patients, were extracted using "TargetMine," a drug discovery tool. We investigated whether the candidate drugs were among the drugs administered within 1 month after cardiac arrest in data of cardiac arrest cases obtained from the Japan Medical Data Center. Logistic regression analysis was performed, with the explanatory variables being the presence or absence of the administration of those candidate drugs that were administered to ≥10 patients and the objective variable being the "survival discharge." Adjusted odds ratios for survival discharge were calculated using propensity scores for drugs that significantly improved the proportion of survival discharge; the influence of covariates, such as patient background, medical history, and treatment factors, was excluded by the inverse probability-of-treatment weighted method. Using the search strategy, we extracted 165 drugs with vasodilator activity as candidate drugs. Drugs not approved in Japan, oral medicines, and external medicines were excluded. Then, we investigated whether the candidate drugs were administered to the 2,227 cardiac arrest patients included in this study. The results of the logistic regression analysis showed that three (isosorbide dinitrate, nitroglycerin, and nicardipine) of seven drugs that were administered to ≥10 patients showed significant association with improvement in the proportion of survival discharge. Further analyses using propensity scores revealed that the adjusted odds ratios for survival discharge for patients administered isosorbide dinitrate, nitroglycerin, and nicardipine were 3.35, 5.44, and 4.58, respectively. Thus, it can be suggested that isosorbide dinitrate, nitroglycerin, and nicardipine could be novel therapeutic agents for improving the prognosis of cardiac arrest patients.

DOI： 10.3389/fphar.2019.01257

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Challenges in Building and Maintaining Rare Disease Patient Registries: Results of a Questionnaire Survey in Japan at 2012

Mizuki Morita, Soichi Ogishima

medRxiv 19004770 2019.8

A new approach to prevent critical cardiac accidents in athletes by real-time electrocardiographic tele-monitoring system: Initial trial in full marathon Reviewed International journal

Daiki Ousaka, Noriko Sakano, Mizuki Morita, Takayuki Shuku, Kazuo Sanou, Shingo Kasahara, Susumu Oozawa

Journal of Cardiology Cases 20 ( 1 ) 35 - 38 2019.5

Language：English Publishing type：Research paper (scientific journal)

The majority of marathon deaths are caused by sudden cardiac arrest (SCA), which occur in approximately 1 in 57,000 runners. Such deaths are more common among older males and usually occur in the last 4 miles of the racecourse. Although prompt resuscitation, including early use of an automated external defibrillator (AED), improves survival, the deployment of enough trained medical staff and AEDs is difficult due to increased cost. Moreover, most victims of exercise-related SCA have no premonitory symptoms. Therefore, we tried to use a novel approach to prevent sudden cardiac deaths (SCD) related to SCA using real-time electrocardiographic tele-monitoring system, as an initial trial to assess operative possibility in a full marathon. As a result, 3 out of 5 runners had reasonable measurement results and sufficient tele-monitoring without complications related to this trial was possible. However, many investigations and improvements, such as improving cost-effectiveness, reducing noise, and automating the monitoring system, are needed for practical application of these devices for athletes. As a next step, we would establish a novel strategy to reduce SCDs in athletes using next-generation devices, which include an alarm system associated with early application of AED. <Learning objectives: Sudden cardiac arrest (SCA) is a major problem in sports cardiology. Here we investigated a novel approach using a real-time tele-monitoring system of electrocardiogram (ECG) to prevent sudden cardiac deaths by making use of an advanced alarm system which responds to SCA risk. Three out of five cases we monitored showed reasonable measurement of ECG with centralized observation in full marathon. This is the first report of this method, which may lead to the effective application of automated external defibrillator in athletes.>.

DOI： 10.1016/j.jccase.2019.03.008

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Tweet Classification Toward Twitter-Based Disease Surveillance: New Data, Methods, and Evaluations Reviewed International journal

Shoko Wakamiya, Mizuki Morita, Yoshinobu Kano, Tomoko Ohkuma, Eiji Aramaki

Journal of Medical Internet Research 21 ( 2 ) e12783 2019.2

Language：English Publishing type：Research paper (scientific journal)

BACKGROUND: The amount of medical and clinical-related information on the Web is increasing. Among the different types of information available, social media-based data obtained directly from people are particularly valuable and are attracting significant attention. To encourage medical natural language processing (NLP) research exploiting social media data, the 13th NII Testbeds and Community for Information access Research (NTCIR-13) Medical natural language processing for Web document (MedWeb) provides pseudo-Twitter messages in a cross-language and multi-label corpus, covering 3 languages (Japanese, English, and Chinese) and annotated with 8 symptom labels (such as cold, fever, and flu). Then, participants classify each tweet into 1 of the 2 categories: those containing a patient's symptom and those that do not. OBJECTIVE: This study aimed to present the results of groups participating in a Japanese subtask, English subtask, and Chinese subtask along with discussions, to clarify the issues that need to be resolved in the field of medical NLP. METHODS: In summary, 8 groups (19 systems) participated in the Japanese subtask, 4 groups (12 systems) participated in the English subtask, and 2 groups (6 systems) participated in the Chinese subtask. In total, 2 baseline systems were constructed for each subtask. The performance of the participant and baseline systems was assessed using the exact match accuracy, F-measure based on precision and recall, and Hamming loss. RESULTS: The best system achieved exactly 0.880 match accuracy, 0.920 F-measure, and 0.019 Hamming loss. The averages of match accuracy, F-measure, and Hamming loss for the Japanese subtask were 0.720, 0.820, and 0.051; those for the English subtask were 0.770, 0.850, and 0.037; and those for the Chinese subtask were 0.810, 0.880, and 0.032, respectively. CONCLUSIONS: This paper presented and discussed the performance of systems participating in the NTCIR-13 MedWeb task. As the MedWeb task settings can be formalized as the factualization of text, the achievement of this task could be directly applied to practical clinical applications.

DOI： 10.2196/12783

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Change Detection in Vital Signs Associated with Impending Death for Homecare Patients Using a Pressure-Sensing Mat Reviewed International journal

Takayuki Shuku, Noriko Sakano, Mizuki Morita, Shingo Kasahara

European Journal for Biomedical Informatics 14 ( 1 ) 52 - 57 2018.2

Medical Attitudes Survey for Female Dystrophinopathy Carriers in Japan Reviewed International journal

Michio Kobayashi, Tomoyuki Hatakeyama, Masatoshi Ishizaki, Katsuhito Adachi, Mizuki Morita, Naohiro Yonemoto, Tsuyoshi Matsumura, Itaru Toyoshima, En Kimura

Internal Medicine 57 ( 16 ) 2325 - 2332 2018

Effects of Cold Ischemia on RNA Stability and Quality of Lung Tissues Based on Standard PREanalytical Code Categorization Reviewed International journal

Takehiro Matsubara, Shuta Tomida, Junichi Soh, Takahiro Uwabo, Yoshiko Mori, Mizuki Morita, Yasutomo Nasu, Susumu Kanazawa, Shinichi Toyooka

Biopreservation and Biobanking 15 ( 5 ) 484 - 486 2017.10

MedNLPDoc: Japanese Shared Task for Clinical NLP Reviewed International journal

Eiji Aramaki, Yoshinobu Kano, Tomoko Ohkuma, Mizuki Morita

Proceedings of the Clinical Natural Language Processing Workshop at the 26th International Conference on Computational Linguistics (COLING 2016) 13 - 16 2016.12

Overview of the NTCIR-12 MedNLPDoc Task. Reviewed

Eiji Aramaki, Mizuki Morita, Yoshinobu Kano, Tomoko Ohkuma

Proceedings of the 12th NTCIR Conference on Evaluation of Information Access Technologies, National Center of Sciences, Tokyo, Japan, June 7-10, 2016 2016

Antitumor effect of afatinib, as a human epidermal growth factor receptor 2-targeted therapy, in lung cancers harboring HER2 oncogene alterations Reviewed International journal

Ken Suzawa, Shinichi Toyooka, Masakiyo Sakaguchi, Mizuki Morita, Hiromasa Yamamoto, Shuta Tomida, Tomoaki Ohtsuka, Mototsugu Watanabe, Shinsuke Hashida, Yuho Maki, Junichi Soh, Hiroaki Asano, Kazunori Tsukuda, Shinichiro Miyoshi

Cancer Science 107 ( 1 ) 45 - 52 2015.11

Analysis for Clinical Data of Cardiac Disease using MDP model

Masanori Shiro, Mizuki Morita, Toshihiro Kamishima, Kouichi Hashida, Shotaro Akaho, Hideki Asoh, Eiji Aramaki, Takahide Kohro, Kazuyuki Aihara, Issei Komuro, Ryozo Nagai

SEISAN KENKYU 67 ( 3 ) 281 - 285 2015.5

Implementation of linked data in the life sciences at BioHackathon 2011 Reviewed

Kiyoko F. Aoki-Kinoshita, Akira R. Kinjo, Mizuki Morita, Yoshinobu Igarashi, Yi-an Chen, Yasumasa Shigemoto, Takatomo Fujisawa, Yukie Akune, Takeo Katoda, Anna Kokubu, Takaaki Mori, Mitsuteru Nakao, Shuichi Kawashima, Shinobu Okamoto, Toshiaki Katayama, Soichi Ogishima

Journal of Biomedical Semantics 6 3 2015.1

Patient-centered medical and health information management and dynamic informed consent Invited

Mizuki Morita

情報管理 57 ( 1 ) 3 - 11 2014.4

Language：Japanese Publisher：科学技術振興機構

Medical and health information, including genetic information, can produce important benefits for both individuals and the public, but this extremely sensitive resource demands special care. Therefore, it is strictly controlled in hospitals and research institutes. Nevertheless, the environment around medical and health information has been changing drastically recently, with the introduction of new ideas. Those changes are expanding the area of personal information under control of patients and the public and are strengthening patient and public involvement in medical research. This paper presents perspectives on recent patient-centered medical and health information management, emphasizing dynamic consent (dynamic informed consent) and recent environmental changes.

DOI： 10.1241/johokanri.57.3

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BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains. Reviewed

Toshiaki Katayama, Mark D Wilkinson, Kiyoko F Aoki-Kinoshita, Shuichi Kawashima, Yasunori Yamamoto, Atsuko Yamaguchi, Shinobu Okamoto, Shin Kawano, Jin-Dong Kim, Yue Wang, Hongyan Wu, Yoshinobu Kano, Hiromasa Ono, Hidemasa Bono, Simon Kocbek, Jan Aerts, Yukie Akune, Erick Antezana, Kazuharu Arakawa, Bruno Aranda, Joachim Baran, Jerven Bolleman, Raoul JP Bonnal, Pier Luigi Buttigieg, Matthew P Campbell, Yi-an Chen, Hirokazu Chiba, Peter JA Cock, K Bretonnel Cohen, Alexandru Constantin, Geraint Duck, Michel Dumontier, Takatomo Fujisawa, Toyofumi Fujiwara, Naohisa Goto, Robert Hoehndorf, Yoshinobu Igarashi, Hidetoshi Itaya, Maori Ito, Wataru Iwasaki, Matúš Kalaš, Takeo Katoda, Taehong Kim, Anna Kokubu, Yusuke Komiyama, Masaaki Kotera, Camille Laibe, Hilmar Lapp, Thomas Lütteke, M Scott Marshall, Takaaki Mori, Hiroshi Mori, Mizuki Morita, Katsuhiko Murakami, Mitsuteru Nakao, Hisashi Narimatsu, Hiroyo Nishide, Yosuke Nishimura, Johan Nystrom-Persson, Soichi Ogishima, Yasunobu Okamura, Shujiro Okuda, Kazuki Oshita, Nicki H Packer, Pjotr Prins, Rene Ranzinger, Philippe Rocca-Serra, Susanna Sansone, Hiromichi Sawaki, Sung-Ho Shin, Andrea Splendiani, Francesco Strozzi, Shu Tadaka, Philip Toukach, Ikuo Uchiyama, Masahito Umezaki, Rutger Vos, Patricia L Whetzel, Issaku Yamada, Chisato Yamasaki, Riu Yamashita, William S York, Christian M Zmasek, Shoko Kawamoto, Toshihisa Takagi

Journal of Biomedical Semantics 5 5 2014.2

Arresting Treatment Patterns for Individual Patients in Clinical Big Data: An Exploratory Procedure.

Mizuki Morita, Masanori Shiro, Shotaro Akaho, Hideki Asoh, Toshihiro Kamishima, Eiji Aramaki, Kôiti Hasida, Takahide Kohro

2014 AAAI Spring Symposia 2014

Comparing Social Media and Search Activity as Social Sensors for the Detection of Influenza Reviewed

Mizuki Morita, Sachiko Maskawa, Eiji Aramaki

Proceedings of the 5th International Symposium on Language in Biology and Medicine (LBM2013) 75 - 79 2013.12

Language：English Publishing type：Research paper (international conference proceedings)

Detecting the incidence and prevalence of infectious diseases is important because these diseases affect many people, raise the cost of healthcare, and, in some cases, can lead to a great many deaths. Recently, it has been shown that people's online activity can be applied to detecting the prevalence of influenza. In this study, we compare the characteristics of two kinds of online activities, social media and search activity, as the social sensors capable of supplying information on seasonal epidemics and an unexpected pandemic of influenza. Although both approaches showed quite high performance for the seasonal epidemics, they showed poor performance for the unexpected influenza pandemic. The social media-based approach particularly over-responded to the influenza pandemic.

File： Twitflu-LBM.pdf

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Difference between Patient Language and Medical Language : Toward a Medical Application Using a Record Written by a Patient(<Special Issue>Data Driven Self-Awareness)

Aramaki Eiji, Maskawa Sachiko, Miyabe Mai, Morita Mizuki

Journal of Japanese Society for Artificial Intelligence 28 ( 6 ) 857 - 861 2013.11

A Word in a Dictionary is used by Numerous Users Reviewed

Eiji Aramaki, Sachiko Maskawa, Mai Miyabe, Mizuki Morita, Sachi Yasuda

Proceedings of the 6th International Joint Conference on Natural Language Processing (IJCNLP 2013) 874 - 877 2013.10

Toxygates: interactive toxicity analysis on a hybrid microarray and linked data platform Reviewed International journal

Johan Nystroem-Persson, Yoshinobu Igarashi, Maori Ito, Mizuki Morita, Noriyuki Nakatsu, Hiroshi Yamada, Kenji Mizuguchi

Bioinformatics 29 ( 23 ) 3080 - 3086 2013.9

Information and Communication Technologies for Minority Groups: Featuring Patients with Rare Disease Invited

Mizuki Morita, Eiji Aramaki

IPSJ Magazine 54 ( 8 ) 834 - 840 2013.7

Online population-based patient registry to collect and share health-related data of rare disease patients

Mizuki Morita, Soichi Ogishima, Kunihiro Nishimura, Eiji Aramaki, Tateo Ito

AAAI Spring Symposium - Technical Report SS-13-03 65 - 66 2013

Overview of the NTCIR-10 MedNLP Task. Reviewed

Mizuki Morita, Yoshinobu Kano, Tomoko Ohkuma, Mai Miyabe, Eiji Aramaki

Proceedings of the 10th NTCIR Conference on Evaluation of Information Access Technologies, NTCIR-10, National Center of Sciences, Tokyo, Japan, June 18-21, 2013 2013

Microblog-based Infectious Disease Detection using Document Classification and Infectious Disease Model Reviewed

Eiji Aramaki, Sachiko Maskawa, Mizuki Morita

Journal of Natural Language Processing 19 ( 5 ) 419 - 435 2012.12

Blind prediction of quaternary structures of homo-oligomeric proteins from amino acid sequences based on templates Reviewed

Mizuki Morita, Masanori Kakuta, Kentaro Shimizu, Shugo Nakamura

Journal of Proteome Science & Computational Biology 1 1 2012.4

Sagace: A web-based search engine for biomedical databases in Japan Reviewed

Mizuki Morita, Yoshinobu Igarashi, Maori Ito, Yi-An Chen, Chioko Nagao, Yuki Sakaguchi, Ryuichi Sakate, Tohru Masui, Kenji Mizuguchi

BMC Research Notes 5 604 2012

Influenza patients are invisible in the web: Traditional model still improves the state-of-the-art web based influenza surveillance

Eiji Aramaki, Sachiko Maskawa, Mizuki Morita

AAAI Spring Symposium - Technical Report SS-12-05 5 - 8 2012

Lipid recognition propensities of amino acids in membrane proteins from atomic resolution data Reviewed

Mizuki Morita, AVSK M. Katta, Shandar Ahmad, Takaharu Mori, Yuji Sugita, Kenji Mizuguchi

BMC Biophysics 4 ( 1 ) 21 2011.12

Twitter Catches The Flu: Detecting Influenza Epidemics using Twitter Streams Reviewed

Eiji Aramaki, Sachiko Maskawa, Mizuki Morita

Proceedings of the 2011 Conference on Empirical Methods in Natural Language Processing (EMNLP 2011) 1568 - 1576 2011.7

BUDDY-system: A web site for constructing a dataset of protein pairs between ligand-bound and unbound states Reviewed

Mizuki Morita, Tohru Terada, Shugo Nakamura, Kentaro Shimizu

BMC Research Notes 4 143 2011

Prediction of carbohydrate-binding proteins from sequences using support vector machines Reviewed

Seizi Someya, Masanori Kakuta, Mizuki Morita, Kazuya Sumikoshi, Wei Cao, Zhenyi Ge, Osamu Hirose, Shugo Nakamura, Tohru Terada, Kentaro Shimizu

Advances in Bioinformatics 2010 289301 2010

Structural bases of GM1 gangliosidosis and Morquio B disease Reviewed International journal

Mizuki Morita, Seiji Saito, Kazuyoshi Ikeda, Kazuki Ohno, Kanako Sugawara, Toshihiro Suzuki, Tadayasu Togawa, Hitoshi Sakuraba

Journal of Human Genetics 54 ( 9 ) 510 - 515 2009.9

Added mass effect on immobilizations of proteins on a 27 MHz quartz crystal microbalance in aqueous solution Reviewed

Hiroyuki Furusawa, Tomomitsu Ozeki, Mizuki Morita, Yoshio Okahata

Analytical Chemistry 81 ( 6 ) 2268 - 2273 2009.3

Highly accurate method for ligand-binding site prediction in unbound state (apo) protein structures Reviewed International journal

Mizuki Morita, Shugo Nakamura, Kentaro Shimizu

Proteins: Structure, Function, and Bioinformatics 73 ( 2 ) 468 - 479 2008.11

Hydration and energy dissipation measurements of biomolecules on a piezoelectric quartz oscillator by admittance analyses Reviewed International journal

Tomomitsu Ozeki, Mizuki Morita, Hiroshi Yoshimine, Hiroyuki Furusawa, Yoshio Okahata

Analytical Chemistry 79 ( 1 ) 79 - 88 2007.1

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