Updated on 2024/02/01

写真a

 
YAMASHITA Jun
 
Organization
Institute of Plant Science and Resources Assistant Professor
Position
Assistant Professor
External link

Degree

  • 博士(理学) ( 大阪市立大学 )

Research Interests

  • plant systematics

  • 系統分類学

  • 生物資源保全学

Research Areas

  • Life Science / Biodiversity and systematics

  • Life Science / Ecology and environment

Education

  • Graduate School of Osaka City University    

    1997.4 - 2001.3

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    Country: Japan

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  • 大阪市立大学大学院   理学研究科   前期博士課程生物地球系専攻

    1995.4 - 1997.3

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    Country: Japan

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  • Osaka City University   理学部   生物学科

    1991.4 - 1995.3

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    Country: Japan

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Research History

  • -

    2007

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  • - Assistant Professor,Institute of Plant Science and Resources,Institute of Plant Science and Resources,Okayama University

    2007

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  • Research Associate,Research Institute for Bioresources,Okayama University

    2006 - 2007

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  • 岡山大学資源生物科学研究所 助手

    2006 - 2007

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Professional Memberships

Committee Memberships

  • 日本雑草学会   用語委員  

    2018.4   

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    Committee type:Academic society

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  • 日本雑草学会   和文誌編集委員  

    2012   

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    Committee type:Academic society

    日本雑草学会

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  • 日本雑草学会   日本雑草学会第48回大会運営委員  

    2008 - 2009   

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    Committee type:Academic society

    日本雑草学会

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  •   稀少野生動植物種保存推進員(環境省)  

    2006   

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    Committee type:Government

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  • 岡山県野生生物調査検討会   植物部会委員  

    2006   

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    Committee type:Municipal

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Papers

  • Phylogenetic analysis of Dioscorea (Dioscoreaceae) from Japan and adjacent regions based on plastid and nuclear DNA sequences, with special reference to the taxonomic status of selected taxa Reviewed International coauthorship International journal

    Hiroshi Noda, Shizuka Fuse, Jun Yamashita, Manop Poopath, Rachun Pooma, Minoru N Tamura

    Botanical Journal of the Linnean Society   198 ( 2 )   186 - 214   2022.2

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Oxford University Press (OUP)  

    <title>Abstract</title>
    To clarify phylogenetic relationships among Japanese Dioscorea taxa and to re-examine taxonomy based on these relationships, we conducted molecular phylogenetic analyses of four plastid regions [trnK (including matK), rbcL, atpB and trnL-F] and two nuclear regions (PHYC and 18S rDNA) for all Dioscorea taxa from Japan and selected taxa from adjacent regions. Although species are often sympatric and variation in leaf shape is relatively wide within species and not clearly demarcated between species, our results suggest that Japanese Dioscorea spp. do not hybridize. Our results also resolve several taxonomic issues surrounding Japanese species. We confirm that D. japonica, D. polystachya, D. pseudojaponica and D. tabatae, which are morphologically similar, are distinct species. Further, plants from the Daito Islands identified as D. luzonensis, which have never been observed to flower to our knowledge, are attributable to D. pseudojaponica. Dioscorea zentaroana, often treated as a synonym of D. asclepiadea, was found to be distinct from the latter. Dioscorea izuensis should be treated as D. collettii var. izuensis. In conclusion, 16 species and three varieties of native Dioscorea should be recognized in Japan.

    DOI: 10.1093/botlinnean/boab052

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  • A revised infrageneric classification of Old World species of Dioscorea (Dioscoreaceae). Reviewed International coauthorship

    Noda, H, Fuse, S, Yamashita, J, Pooma, R, Poopath, M, Tobe, H, Tamura, M. N

    Acta Phytotaxonomica et Geobotanica   71 ( 3 )   187 - 199   2020.10

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  • Initial invasion of glyphosate-resistant Amaranthus palmeri around grain-import ports in Japan. Reviewed International journal

    Shimono, A, Kanbe, H, Nakamura, S, Ueno, S, Yamashita, J, Asai, M

    Plants, People, Planet   2 ( 6 )   640 - 648   2020.9

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  • A large-scale phylogenetic analysis of Dioscorea (Dioscoreaceae), with reference to character evolution and subgeneric recognition. Reviewed International coauthorship

    Noda, H, Yamashita, J, Fuse, S, Pooma, R, Poopath, M, Tobe, H, Tamura, M. N

    Acta Phytotaxonomica et Geobotanica   71 ( 2 )   103 - 128   2020.6

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  • Phylogeny and taxonomy of Carex (Cyperaceae) in Japan I. C. sect. Rarae. Reviewed

    Oda, J, Fuse, S, Yamashita, J, Tamura, M. N

    Acta Phytotaxonomica et Geobotanica   70 ( 2 )   69 - 85   2019.6

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  • Factors affecting 137Cs concentration in wild plants and soils of different land use in Iitate village after the Fukushima nuclear plant accident. Reviewed

    Wakai, N, Yamashita, J, Enomoto, T, Hanafusa, T, Ono, T, Maeda, M

    Radiation Safety Management   18   1 - 8   2019.2

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  • Effects of Skunk Vine(Rubiaceae)on Spider Mite(Acari: Tetranychidae)Occurrence at Peach Orchards as an Insectary Plant of Phytoseiid Mites(Acari: Phytoseiidae)

    David Wari, Tsubasa Sato, Jun Yamashita, Shoji Sonoda

    Japanese journal of applied entomology and zoology   61 ( 3 )   178 - 183   2017

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Japanese Society of Applied Entomology & Zoology  

    Earlier studies have demonstrated that Paederia foetida L. (skunk vine) harbors larger numbers of phytoseiid mites for longer periods than any other wild plant in peach orchards. To assess the effectiveness of P. foetida in spider mite control, first, longevity and fecundity of Tetranychus kanzawai Kishida were examined in the laboratory using P foetida and Phaseolus vulgaris L. as host plants. Results showed that all T. kanzawai larvae died without molting and that female adults laid few eggs on R. foetida. No such adverse effect on larvae or female adults was observed on P. vulgaris. Then, population surveys of spider mites and phytoseiid mites were conducted on peach trees with and without P foetida. Results showed that the presence of P foetida itself was inadequate to achieve decreased spider mite populations on peach leaves under any circumstances.

    DOI: 10.1303/jjaez.2017.178

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  • Utilization of plant food resources by phytoseiid mite species with different feeding habits

    David Wari, Jun Yamashita, Hidenari Kishimoto, Shoji Sonoda

    Applied Entomology and Zoology   51 ( 4 )   539 - 547   2016.11

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    To examine the utilization of plant food resources by the phytoseiid mite species Amblyseius eharai Amitai & Swirski, Euseius sojaensis (Ehara), and Neoseiulus californicus (McGregor) (Acarina: Phytoseiidae), we collected phytoseiid mites on peach leaves in Japanese peach orchards. Then, phytoseiid mite samples that had been estimated to contain a single phytoseiid mite species using quantitative sequencing were selected. Simultaneously, we surveyed pollen available for phytoseiid mites in peach orchards and selected Digitaria ciliaris (Retz.) Koeler (Poales: Poaceae), Eleusine indica (L.) Gaertn. (Poales: Poaceae), and Pinus densiflora Siebold & Zucc. (Pinales: Pinaceae) as pollen source plants. Subsequently, the internal transcribed spacer sequences of ribosomal genes or the non-coding region of the chloroplast DNA of the three plant species were amplified from phytoseiid mite samples using polymerase chain reaction. Results showed that phytoseiid mite species with different feeding habits use plant food sources, possibly pollens, of D. ciliaris and P. densiflora.

    DOI: 10.1007/s13355-016-0429-0

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    Other Link: http://link.springer.com/article/10.1007/s13355-016-0429-0/fulltext.html

  • Adsorption and removal of strontium in aqueous solution by synthetic hydroxyapatite Reviewed

    Yuichi Nishiyama, Tadashi Hanafusa, Jun Yamashita, Yoko Yamamoto, Toshiro Ono

    Journal of Radioanalytical and Nuclear Chemistry   307 ( 2 )   1279 - 1285   2016.2

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    Hydroxyapatite (HAP) is a main mineral constituent of bone and tooth and has an outstanding bio-compatibility. HAP is a possible sorbent for heavy metals in wastewater due to its high adsorption capacity and low water solubility. We developed a removal system of Sr-90 from aqueous solution by HAP column procedure. More than 90 % of Sr-90 was adsorbed and removed from the Sr-90 containing solution. Divalent cations, Ca2+, had little effect on the removal of Sr-90 up to a concentration of 1 mmol L-1. This clearly indicates that the HAP column technique is advantageous with respect to the capacity to adsorb Sr-90 from water present in the environment.

    DOI: 10.1007/s10967-015-4228-9

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    Other Link: http://link.springer.com/article/10.1007/s10967-015-4228-9/fulltext.html

  • Population survey of phytoseiid mites and spider mites on peach leaves and wild plants in Japanese peach orchard

    David Wari, Jun Yamashita, Yoko Kataoka, Yoko Kohara, Norihide Hinomoto, Hidenari Kishimoto, Shingo Toyoshima, Shoji Sonoda

    Experimental and Applied Acarology   63 ( 3 )   313 - 332   2014.7

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    A population survey of phytoseiid mites and spider mites was conducted on peach leaves and wild plants in Japanese peach orchards having different pesticide practices. The phytoseiid mite species composition on peach leaves and wild plants, as estimated using quantitative sequencing, changed during the survey period. Moreover, it varied among study sites. The phytoseiid mite species compositions were similar between peach leaves and some wild plants, such as Veronica persica, Paederia foetida, Persicaria longiseta, and Oxalis corniculata with larger quantities of phytoseiid mites, especially after mid-summer. A PCR-based method to detect the ribosomal ITS sequences of Tetranychus kanzawai and Panonychus mori from phytoseiid mites was developed. Results showed that Euseius sojaensis (specialized pollen feeder/generalist predator) uses both spider mites as prey in the field.

    DOI: 10.1007/s10493-014-9788-9

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    Other Link: http://link.springer.com/article/10.1007/s10493-014-9788-9/fulltext.html

  • Estimation of soil-to-plant transfer factors of radiocesium in 99 wild plant species grown in arable lands 1 year after the Fukushima 1 Nuclear Power Plant accident Reviewed International journal

    Jun Yamashita, Takashi Enomoto, Masao Yamada, Toshiro Ono, Tadashi Hanafusa, Tomohiro Nagamatsu, Shoji Sonoda, Yoko Yamamoto

    Journal of Plant Research   127 ( 1 )   11 - 22   2014.1

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    One year after the deposition of radionuclides from the Fukushima 1 Nuclear Power Plant (A formal name is Fukushima Daiichi Nuclear Power Station) in March 2011, radiocesium (Cs-134, Cs-137) concentrations ([Cs]) were comprehensively investigated in the wild plants of 99 species most of which were annual or summer green perennial herbs and started to grow from April 2012 at the heavily contaminated fields of paddy (three study sites) and upland (one study site) in Fukushima Prefecture. The survey was conducted three times (April, July and October) in the year. In each site, soils (soil cores of 5-cm depth) and plants (aerial shoots) were collected for determination of [Cs] on a dry weight basis, and then the transfer factor (TF) of radiocesium from soil to plant ([Cs](plant)/[Cs](soil)) was estimated in each species. The [Cs] values of both soils and plants largely varied. However, some species exhibited relatively high TF values (more than 0.4) (e.g., Athyrium yokoscense, Dryopteris tokyoensis, and Cyperus brevifolius), while others exhibited almost negligible values (less than 0.01) (e.g., Salix miyabeana, Humulus scandens, and Elymus tsukushiensis). In addition, judging from the 11 species grown in both paddy and upland fields, TF values were generally higher in the paddy fields. The estimation of phytoextraction efficiency of soil radiocesium by weed communities in the paddy fields suggests that the weed community is not a practical candidate for phytoremediation technique.

    DOI: 10.1007/s10265-013-0605-z

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    Other Link: http://link.springer.com/article/10.1007/s10265-013-0605-z/fulltext.html

  • Short-term effects of mowing on insect communities in Japanese peach orchards Reviewed

    Shoji Sonoda, Jun Yamashita, Yozo Koshiyama, Yoko Kohara, Takashi Enomoto

    Applied Entomology and Zoology   48 ( 1 )   65 - 72   2013.2

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    Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    DOI: 10.1007/s13355-012-0153-3

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    Other Link: http://link.springer.com/article/10.1007/s13355-012-0153-3/fulltext.html

  • Ecological survey of insects and weeds in peach orchards with different pesticide practices. Reviewed

    Shoji Sonoda, Jun Yamashita, Yoko Kohara, Yozo Koshiyama, Takashi Enomoto

    55   1 - 12   2013

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  • A Phylogenetic Re-evaluation of Morphological Variations of Starch Grains among Poaceae Species Reviewed

    Ryo Matsushima, Jun Yamashita, Shungo Kariyama, Takashi Enomoto, Wataru Sakamoto

    Journal of Applied Glycoscience   60 ( 1 )   37 - 44   2013

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:The Japanese Society of Applied Glycoscience  

    DOI: 10.5458/jag.jag.jag-2012_006

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  • Biosystematic studies on the family Tofieldiaceae III. Classification of Tofieldia nuda into three species and three varieties Reviewed International coauthorship International journal

    Minoru N. Tamura, Shizuka Fuse, Nam Sook Lee, Jin Ohk Kim, Jun Yamashita, Takaaki Ishii

    TAXON   60 ( 5 )   1339 - 1348   2011.10

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    In order to reexamine the taxonomic coherence or Tofieldia nuda, which shows wide morphological variation within the species, we analysed sequences of plastid trnK, trnL, and trnL-F and nuclear ITS of T. nada and seven further species of Tofieldia. We found that T. nuda contains three different lineages supported with 99% or 100% bootstrap value: one lineage sister to T. coccinea (100%), one linage sister to the Chinese species T. divergens and T. thibetica (98%-100%), and a third lineage sister to the second lineage plus T. divergens and T. thibetica (99%-100%). As the wide morphological gaps among T. nuda, T. coccinea, T. divergens, and T. thibetica prevent us from considering them as conspecific with one another, the three lineages of T. nuda are regarded as different at the species level. The first lineage corresponds to T. nuda s.str., the second to T. furusei (formerly T. nuda var. furusei), and the third to T. yoshiiana, often considered a synonym of T. nuda. Tofieldia yoshiiana is further divided into three varieties, var. yoshiiana, var. kanwonensis comb. nov. and var. hyugaensis var. nov. A key to the three species and varieties is provided.

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  • Population survey of spiders using mt-DNA (COI) sequences in Japanese peach orchards. Reviewed

    Sonoda, S, Yamashita, J, Kohara, Y, Izumi, Y, Yoshida, H, Enomoto, T

    46 ( 1 )   81 - 86   2011.2

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    In this study, we attempted a population survey of spiders in peach orchards with and without pesticide application; however, we had difficulty discriminating them. To identify spiders, we determined the nucleotide sequences of a ca. 640-bp region in the mitochondrial cytochrome oxidase subunit I (COI) gene from 17 species belonging to eight families. To identify five wolf spiders (Araneae: Lycosidae), which are the most abundant spiders in peach orchards in Okayama Prefecture, PCR and restriction fragment length polymorphism were developed on the basis of the COI gene sequences. Population survey results suggest that pesticide applications adversely affect spider populations in peach orchards.

    DOI: 10.1007/s13355-010-0011-0

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  • Biosystematic studies on the family Tofieldiaceae II. Phylogeny of species of Tofieldia and Triantha inferred from plastid and nuclear DNA sequences. Reviewed

    Minoru N. Tamura, Hiroshi Azuma, Jun Yamashita, Shizuka Fuse, Takaaki Ishii

    Acta Phytotaxonomica et Geobotanica   60 ( 3 )   131 - 140   2010

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    DOI: 10.18942/apg.KJ00006252743

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  • A new species of Dioscorea (Dioscoreaceae) from Japan. Reviewed

    Jun Yamashita, Minoru N. Tamura

    Acta Phytotaxonomica et Geobotanica   59 ( 1 )   51 - 53   2008

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.18942/apg.KJ00004899887

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  • Phylogenetic analyses and chromosome evolution in Convallarieae (Ruscaceae sensu lato), with some taxonomic treatments Reviewed International journal

    Jun Yamashita, Minoru N. Tamura

    Journal of Plant Research   117 ( 5 )   363 - 370   2004.10

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    The tribe Convallarieae, comprising 10 genera and 95 species, has recently been transferred from its own family to Ruscaceae sensu lato. In this study, sequence data from trnK and rbcL were analyzed for 19 species in 8 genera, and chromosome morphology was analyzed for 17 species in 7 genera. The parsimony analysis of trnK and rbcL sequences showed that Convallarieae are monophyletic. Although early branches did not receive strong bootstrap support, Convallaria diverged at the first branch, followed by Speirantha. The rest of the tribe was split into three, well-supported clades: one with Reineckea, the second with Campylandra and Rohdea, and the third with Tupistra, Tricalistra, and Aspidistra. Two monotypic genera, Rohdea and Tricalistra, were embedded in a clade of Campylandra and of Tupistra, respectively. Three karyotypes were distinguished in the tribe on the basis of the basic number and morphology of metaphase chromosomes: Convallaria type (with x = 19 and unimodal chromosome length), Tupistra type (with x = 19 and trimodal chromosome length), and Aspidistra-elatior type (with x = 18 and trimodal chromosome length). The character-state distribution in the molecular tree showed that the Convallaria type is plesiomorphic, from which was derived the Tupistra type and subsequently the Aspidistra-elatior type. Taxonomic treatments to transfer Campylandra to Rohdea and Tricalistra to Tupistra are also given.

    DOI: 10.1007/s10265-004-0169-z

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  • Molecular phylogeny of monocotyledons inferred from combined analysis of plastid matK and rbcL gene sequences Reviewed International journal

    Minoru N. Tamura, Jun Yamashita, Shizuka Fuse, Masatake Haraguchi

    Journal of Plant Research   117 ( 2 )   109 - 120   2004.4

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    Using matK and rbcL sequences (3,269 bp in total) from 113 genera of 45 families, we conducted a combined analysis to contribute to the understanding of major evolutionary relationships in the monocotyledons. Trees resulting from the parsimony analysis are similar to those generated by earlier single or multiple gene analyses, but their strict consensus tree provides much better resolution of relationships among major clades. We find that Acorus (Acorales) is a sister group to the rest of the monocots, which receives 100% bootstrap support. A clade comprising Alismatales is diverged as the next branch, followed successively by Petrosaviaceae, the Dioscoreales-Pandanales clade, Liliales, Asparagales and commelinoids. All of these clades are strongly supported (with more than 90% bootstrap support). The sister-group relationship is also strongly supported between Alismatales and the remaining monocots (except for Acorus) (100%), between Petrosaviaceae and the remaining monocots (except for Acorus and Alismatales) (100%), between the clade comprising Dioscoreales and Pandanales and the clade comprising Liliales, Asparagales and commelinoids (87%), and between Liliales and the Asparagales-commelinoids clade (89%). Only the sister-group relationship between Asparagales and commelinoids is weakly supported (68%). Results also support the inclusion of Petrosaviaceae in its own order Petrosaviales, Nartheciaceae in Dioscoreales and Hanguanaceae in Commelinales.

    DOI: 10.1007/s10265-003-0133-3

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  • Diversity and structure of soil fungal communities unveil the building history of a burial mound of ancient Japan (Tobiotsuka Kofun, Okayama Prefecture). Reviewed International coauthorship International journal

    Samuele Voyron, Chiara Tonon, Laura Guglielmone, Luisella Celi, Cesare Comina, Hajime Ikeda, Naoko Matsumoto, Daniele Petrella, Joseph Ryan, Kazuhiro Sato, Akira Seike, Ivan Varriale, Jun Yamashita, Sergio E, Favero-Longo, Eleonora Bonifacio

    Journal of Archaeological Science   146   105656 - 105656   2022.10

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    DOI: 10.1016/j.jas.2022.105656

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  • RADIOCESIUM CONCENTRATION IN STEMS, LEAVES, AND PANICLES OF RICE GROWN IN A SANDY SOIL REPLACEMENT PADDY FIELD TREATED WITH DIFFERENT RATES OF CATTLE MANURE COMPOST IN KAWAMATA, FUKUSHIMA

    Nittaya WAKAI, Morihiro MAEDA, Toshiro ONO, Tadashi HANAFUSA, Jun YAMASHITA, Kuniyuki SAITOH

    Journal of Environmental Science for Sustainable Society   9   1 - 10   2019

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    Publishing type:Research paper (scientific journal)   Publisher:Graduate School of Environmental Science, Okayama University  

    DOI: 10.3107/jesss.9.1

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  • Karyotype analysis of two species of the Chinese epiphytic genus Heteropolygonatum (Convallariaceae- Polygonateae) Reviewed

    Yamashita, J, Tamura, M. N

    Acta Phytotax. Geobot.   51 ( 2 )   147 - 153   2001

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    Language:English   Publisher:Japanese Society for Plant Systematics  

    Heteropolygonatum xui and H. ogisui were karyologically investigated for the first time. H. xui was found to be diploid with 2n=32 and H. ogisui was tetraploid with 2n=64, a new count for the genus. At the present stage, all species of the genus except H. ginfushanicum, i.e. H. roseolum, H. pendulum, H. xui and H. ogisui, were karyologically revealed, and all of the four species have the same basic chromosome number of x=16. Accordingly, the genus Heteropolygonatum may be uniform in basic chromosome number. It is also confirmed that the basic chromosome number is one of the characters available for distinguishing Heteropolygonatum from Polygonatum.

    DOI: 10.18942/bunruichiri.KJ00001077464

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Books

  • 岡山県野生生物目録2019

    岡山県野生動植物調査検討会( Role: Joint editor ,  維管束植物 pp.435-498)

    岡山県環境文化部自然環境課  2020.3 

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  • 岡山県版レッドデータブック2020植物編

    岡山県野生動植物調査検討会( Role: Contributor ,  シダ植物72種、旧ユリ科11種、他多数)

    岡山県環境文化部自然環境課  2020.3 

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  • 岡山県赤磐市植物目録2017

    岡山県植物誌研究会  2017 

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  • Flora of Japan

    Jun Yamashita and Minoru N. Tamura( Role: Contributor ,  Dioscoreaceae)

    2016  ( ISBN:9784061546080

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    Language:English Book type:Scholarly book

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  • Flora of Japan

    Jun Yamashita, Minoru N. Tamura( Role: Contributor ,  Asparagus, Liriope and Ophiopogon (Liliaceae))

    2016  ( ISBN:9784061546080

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    Language:English

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  • 都市・森・人をつなぐ -森の植物園からの提言-

    京都大学学術出版会  2014  ( ISBN:9784876982882

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  • ヒイゴ池湿地環境調査報告書2013

    ヒイゴ池湿地環境調査団( Role: Joint editor ,  植物編)

    岡山県総社市  2013.9 

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  • 雑草学事典WEB版・CD-ROM版

    ( Role: Contributor)

    日本雑草学会  2011 

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  • A Check List of Wild Vascular Plants in Okayama City. (2010)

    ( Role: Joint editor)

    2010.3 

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  • Red Data Book in Okayama

    ( Role: Contributor)

    2010.3 

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  • 岡山県のレッドデータ生物

    ( Role: Contributor)

    倉敷市立自然史博物館  2010 

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  • 岡山県野生生物目録(2009)

    岡山県野生動植物調査検討会( Role: Joint editor ,  維管束植物)

    岡山県生活環境部自然環境課  2009.3 

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  • 旧山手村植物目録

    小澤佑二・榎本敬・木下延子・片山久・小畠裕子・溝手啓子・剣持玲子・山下純・片岡博行( Role: Joint editor)

    総社市生活環境部環境課  2007.3 

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  • 大垣市里山学習林自然環境調査報告書

    ( Role: Contributor)

    大垣市里山学習林自然環境調査委員会  2007 

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MISC

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Presentations

  • Wild plant seedbank of the Institute of Plant Science and Resources, Okayama University. Invited

    Jun Yamashita

    International symposium: conservation of plant diversity in the east asia islands: toward strengthen the effectiveness of ex-situ conservation.  2019.5.13 

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    Language:English   Presentation type:Oral presentation (general)  

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  • 有蹄類の低密度化後に定着した植物の形質:洞爺湖中島の事例

    日本生態学会第64回全国大会  2017 

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  • A review of the herbarium of Institute of Plant Science and Resources, Okayama University

    26th Asian-Pacific Weed Science Society Conference  2017 

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  • Radiocesium concentration in panicles, leaves and stems of rice in a sandy-soil-dressed paddy field treated with different rates of cattle-manure compost in Kawamata, Fukushima.

    日本土壌肥料学会 2016年度大会  2016 

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  • シダ類中の放射性セシウムの解析

    日本放射線安全管理学会 第15回学術大会  2016 

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  • 福島汚染農地から採取した雑草類の放射線画像解析

    日本放射線安全管理学会第14回学術大会  2015 

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  • Colletotrichum orbiculare species complexに属する炭疽病菌の細胞学的核型解析と宿主特異性の検討

    日本植物病理学会研究集会2015  2015 

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  • カブリダニの温存植物ヤイトバナの選抜と評価

    平成27年度日本応用動物昆虫学会中国支部・日本昆虫学会中国支部合同例会  2015 

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  • Effects of soil properties on soil-to-weed transfer factors of 137Cs in agricultural soil affected by the Fukushima 1 nuclear power plant accident.

    日本土壌肥料学会2015年度大会  2015 

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  • 福島県の放射能汚染農地に生育する野生植物の放射性セシウム濃度

    第32回資源植物科学シンポジウム:東日本大震災被災農地の営農再開に向けて  2015 

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  • A study on phytoremediation efficiency of soil radiocesium by wild plants grown in arable lands one year after the Fukushima 1 Nuclear Power Plant Accident.

    BIT’s 7th Annual World Congress of Industrial Biotechnology  2014 

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  • 福島第1原発事故から1年を経た放射能汚染農地に自生する野生植物による土壌からの放射性セシウム除去効率の評価.

    共同利用/共同研究拠点シンポジウム-植物による東日本大震災被災農地の修復-  2014 

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  • Estimation of soil-to-plant transfer factors of radiocesium in wild plants species grown in arable lands one year after Fukushima Dai-ichi Nuclear Power Station accident.

    Symposium supported by Joint Usage/Research Center -Restoration of Arable Lands on Damaged by Great East Japan Earthquake Using Plants-  2014 

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  • 岡山県のモモ圃場におけるカブリダニ温存野生植物の探索とコウズケカブリダニのハダニ密度抑制能について

    平成26年度日本応用動物昆虫学会中国支部・日本昆虫学会中国支部合同例会  2014 

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  • イネ科植物の澱粉粒の形状多様性についての研究

    日本育種学会 第123回講演会  2013 

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  • 草刈がモモ圃場の昆虫相に及ぼす短期的影響について.

    第57回日本応用動物昆虫学会大会  2013 

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  • 大阪市立大学理学部附属植物園に野生するシダ植物と種子植物の種多様性調査と評価

    第26回ニッセイ財団助成研究ワークショップ: 都市と森の共生をめざして  2012 

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  • 大阪市立大学理学部附属植物園における雑草フロラ~過去と現在~

    日本雑草学会第51回大会  2012 

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  • Achene micromorphology variarions of Carex sect. Rarae in Japan.

    東アジア植物分類学国際シンポジウム  2011 

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  • 日本産カヤツリグサ属 (カヤツリグサ科) の分類学的再検討

    日本雑草学会第50回講演会  2011 

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  • 日本産ヤマノイモ属(ヤマノイモ科)の分子系統と分類学的再検討

    日本植物分類学会第9回大会  2010 

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  • 分子系統に基づくカヤツリグサ科スゲ属のミヤマカンスゲと近縁種群の分類学的再検討

    日本植物学会第74回大会  2010 

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  • 雑草を含むカヤツリグサ属(カヤツリグサ科)の分類学的再検討

    日本雑草学会第49回大会  2010 

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  • ハナゼキショウ(チシマゼキショウ科)の分割

    日本植物分類学会第9回大会  2010 

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  • 日本国内のイネ科野草数種から見出された本邦未報告のNeotyphodiumエンドファイト.

    平成21年度日本植物病理学会大会  2009 

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  • 岡山大学資源生物科学研究所・日本の帰化植物種子画像データベースの再検討.

    日本雑草学会 第47回大会  2008 

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  • 日本におけるメリケンカルカヤの分布地の年代変化と現状.

    日本雑草学会 第47回大会  2008 

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  • 検索機能を持つ外来植物種子画像データベースの公開

    日本雑草学会 第46回大会  2007 

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  • An aggressive invader plant Andropogon virginicus L. in Japan and Hawaii Islands.

    21st Asian Pasific Weed Science Society Conference  2007 

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  • To clarify the species from their seeds - Creating the database of invasive plants for risk assessment.

    21st Asian Pasific Weed Science Society Conference  2007 

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  • 日本産スゲ属(カヤツリグサ科)の分子系統

    日本植物分類学会 第6回大会  2007 

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  • 単子葉植物のmatK遺伝子による大規模分子系統樹

    日本植物分類学会 第6回大会  2007 

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  • メリケンカルカヤの日本とハワイ島における分布について

    日本雑草学会 第46回大会  2007 

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  • 種子からその種類を判定する-外来植物データベースの作成-

    第5回公開セミナー 外来植物の「リスク」を調べて蔓延を防止する  2006 

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Awards

  • 日本雑草学会第49回大会ベスト講演賞

    2010  

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    Country:Japan

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Research Projects

  • 根圏生態系の季節変動から紐解く二毛作体系

    2019.04 - 2022.03

    日本学術振興会  科学研究費助成事業(科研費)  基盤研究B

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    Authorship:Coinvestigator(s) 

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  • Construction of a mega-scale molecular phylogenetic tree and establishment of a new taxonomic system based on both morphological and molecular data of the monocotyledons

    Grant number:17570084  2005 - 2006

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    TAMURA Minoru N., FUSE Shizuka, YAMASHITA Jun

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    Grant amount:\3500000 ( Direct expense: \3500000 )

    Using sequences of plastid matK, which was one of the genes recommended as a DNA barcode for land plants, from 1006 samples of 931 genera, we conducted a parsimony analysis to construct a mega-scale phylogenetic tree of the monocots and to evaluate discriminatory power of the matK among monocot genera from the angle of resolution of the phylogenetic tree. Strict consensus of 247,500 equally most parsimonious trees comprises 695 dichotomous branchings and 99 polychotomous branchings. That is, about 88% of branchings is dichotomous. The strict consensus tree includes 236 clades (about 30% of all the clades) that receive 100% bootstrap support and 198 clades (about 25% of all the clades) that receive 90%-99% bootstrap support. Thus, the strict consensus tree resolved the phylogeny of the monocots well, although it is a mega-scale tree composed of more than 1000 samples. Discriminatory power of the matK was confirmed in the monocots. The basic frame of the present mega-scale phylogenetic tree of the monocots well agrees to earlier monocot phylogenetic trees.

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Class subject in charge

  • Plant Morphology (2023academic year) Third semester  - 水1,水2

  • Plant Morphology (2022academic year) Third semester  - 水1,水2

  • Plant Morphology (2021academic year) Third semester  - 水1,水2

  • Plant Morphology (2020academic year) Third semester  - 水1,水2

 

Social Activities

  • 自然の標本なんでも相談会

    Role(s):Lecturer

    倉敷市立自然史博物館  2023.8.13

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  • 自然観察会「第28回シダの世界」

    Role(s):Lecturer

    2023.7.1

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    Audience: General

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  • 自然の標本なんでも相談会

    Role(s):Lecturer

    2022.8.14

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  • 自然観察会「第27回シダの世界」

    Role(s):Lecturer

    2022.7.2

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  • 自然の標本なんでも相談会

    Role(s):Lecturer

    倉敷市立自然史博物館  2021.8.16

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    Type:Other

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  • 自然の標本なんでも相談会

    Role(s):Lecturer

    倉敷市立自然史博物館  2020.8.16

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    Type:Other

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