2024/12/20 更新

写真a

ウエダ ユウキ
上田 優輝
UEDA Yuki
所属
医歯薬学域 助教
職名
助教
連絡先
メールアドレス
プロフィール

1987年2月26日生まれ

2005年3月 岡山県立岡山一宮高等学校 理数科 卒業
2005年4月 岡山理科大学 理学部化学科 入学
2009年3月 同上 卒業
2009年4月 岡山大学 大学院医歯薬学総合研究科 修士課程 入学
2011年3月 同課程 修了
2011年4月 岡山大学 大学院医歯薬学総合研究科 博士課程 入学
2011年6月24日 第27回中国四国ウイルス研究会 優秀演題賞 受賞
2012年4月~2015年3月 日本学術振興会 特別研究員(DC1) 採用
2015年3月 同課程 修了
2015年4月 岡山大学 大学院医歯薬学総合研究科 助教 採用(腫瘍ウイルス学分野)
2021年5月 教室名が腫瘍微小環境学に変更
現在に至る

学位

  • 博士(医学) ( 岡山大学 )

  • 修士(医科学) ( 岡山大学 )

  • 学士(理学) ( 岡山理科大学 )

研究キーワード

  • HBV

  • HCV

  • C型肝炎ウイルス

  • 分子生物学

  • B型肝炎ウイルス

  • 肝細胞癌

  • バイオインフォマティクス

  • 腫瘍微小環境

  • がん免疫療法

研究分野

  • ライフサイエンス / 分子生物学

  • ライフサイエンス / ウイルス学

  • ライフサイエンス / 免疫学

  • ライフサイエンス / 腫瘍生物学

  • その他 / その他  / バイオインフォマティクス

学歴

  • 岡山大学    

    2011年4月 - 2015年3月

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    国名: 日本国

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  • 岡山大学    

    2009年4月 - 2011年3月

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    国名: 日本国

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  • 岡山理科大学   Faculty of Science   Department of Chemistry

    2005年4月 - 2009年3月

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    国名: 日本国

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経歴

  • 岡山大学 学術研究院 医歯薬学域   腫瘍微小環境学分野   助教

    2021年5月 - 現在

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    国名:日本国

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  • 岡山大学大学院 医歯薬学総合研究科   腫瘍ウイルス学分野   助教

    2015年4月 - 2021年4月

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    国名:日本国

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  • 日本学術振興会特別研究員   DC1

    2012年4月 - 2015年3月

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    国名:日本国

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所属学協会

  • 日本癌学会

    2012年4月 - 現在

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  • 日本肝臓学会

    2010年4月 - 現在

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  • 日本ウイルス学会

    2009年4月 - 現在

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  • 中国四国ウイルス研究会

    2009年4月 - 現在

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委員歴

  • 国立大学法人岡山大学   安全衛生委員  

    2022年4月 - 現在   

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  • 安全衛生委員  

    2022年4月 - 2023年3月   

 

論文

  • Somatic mutations in tumor-infiltrating lymphocytes impact on antitumor immunity. 国際誌

    Fumiaki Mukohara, Kazuma Iwata, Takamasa Ishino, Takashi Inozume, Joji Nagasaki, Youki Ueda, Ken Suzawa, Toshihide Ueno, Hideki Ikeda, Katsushige Kawase, Yuka Saeki, Shusuke Kawashima, Kazuo Yamashita, Yu Kawahara, Yasuhiro Nakamura, Akiko Honobe-Tabuchi, Hiroko Watanabe, Hiromichi Dansako, Tatsuyoshi Kawamura, Yutaka Suzuki, Hiroaki Honda, Hiroyuki Mano, Shinichi Toyooka, Masahito Kawazu, Yosuke Togashi

    Proceedings of the National Academy of Sciences of the United States of America   121 ( 35 )   e2320189121   2024年8月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Immune checkpoint inhibitors (ICIs) exert clinical efficacy against various types of cancers by reinvigorating exhausted CD8+ T cells that can expand and directly attack cancer cells (cancer-specific T cells) among tumor-infiltrating lymphocytes (TILs). Although some reports have identified somatic mutations in TILs, their effect on antitumor immunity remains unclear. In this study, we successfully established 18 cancer-specific T cell clones, which have an exhaustion phenotype, from the TILs of four patients with melanoma. We conducted whole-genome sequencing for these T cell clones and identified various somatic mutations in them with high clonality. Among the somatic mutations, an SH2D2A loss-of-function frameshift mutation and TNFAIP3 deletion could activate T cell effector functions in vitro. Furthermore, we generated CD8+ T cell-specific Tnfaip3 knockout mice and showed that Tnfaip3 function loss in CD8+ T cell increased antitumor immunity, leading to remarkable response to PD-1 blockade in vivo. In addition, we analyzed bulk CD3+ T cells from TILs in additional 12 patients and identified an SH2D2A mutation in one patient through amplicon sequencing. These findings suggest that somatic mutations in TILs can affect antitumor immunity and suggest unique biomarkers and therapeutic targets.

    DOI: 10.1073/pnas.2320189121

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  • Fatty acid metabolism constrains Th9 cell differentiation and antitumor immunity via the modulation of retinoic acid receptor signaling 査読 国際誌

    Takahiro Nakajima, Toshio Kanno, Yuki Ueda, Keisuke Miyako, Takeru Endo, Souta Yoshida, Satoru Yokoyama, Hikari K. Asou, Kazuko Yamada, Kazutaka Ikeda, Yosuke Togashi, Yusuke Endo

    Cellular & Molecular Immunology   21 ( 11 )   1266 - 1281   2024年8月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Springer Science and Business Media LLC  

    Abstract

    T helper 9 (Th9) cells are interleukin 9 (IL-9)-producing cells that have diverse functions ranging from antitumor immune responses to allergic inflammation. Th9 cells differentiate from naïve CD4+ T cells in the presence of IL-4 and transforming growth factor-beta (TGF-β); however, our understanding of the molecular basis of their differentiation remains incomplete. Previously, we reported that the differentiation of another subset of TGF-β–driven T helper cells, Th17 cells, is highly dependent on de novo lipid biosynthesis. On the basis of these findings, we hypothesized that lipid metabolism may also be important for Th9 cell differentiation. We therefore investigated the differentiation and function of mouse and human Th9 cells in vitro under conditions of pharmacologically or genetically induced deficiency of the intracellular fatty acid content and in vivo in mice genetically deficient in acetyl-CoA carboxylase 1 (ACC1), an important enzyme for fatty acid biosynthesis. Both the inhibition of de novo fatty acid biosynthesis and the deprivation of environmental lipids augmented differentiation and IL-9 production in mouse and human Th9 cells. Mechanistic studies revealed that the increase in Th9 cell differentiation was mediated by the retinoic acid receptor and the TGF-β–SMAD signaling pathways. Upon adoptive transfer, ACC1-inhibited Th9 cells suppressed tumor growth in murine models of melanoma and adenocarcinoma. Together, our findings highlight a novel role of fatty acid metabolism in controlling the differentiation and in vivo functions of Th9 cells.

    DOI: 10.1038/s41423-024-01209-y

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    その他リンク: https://www.nature.com/articles/s41423-024-01209-y

  • CD106 in Tumor-Specific Exhausted CD8+ T Cells Mediates Immunosuppression by Inhibiting TCR Signaling 査読

    Yuto Naoi, Takao Morinaga, Joji Nagasaki, Ryo Ariyasu, Youki Ueda, Kazuo Yamashita, Wenhao Zhou, Shusuke Kawashima, Katsushige Kawase, Akiko Honobe-Tabuchi, Takehiro Ohnuma, Tatsuyoshi Kawamura, Yoshiyasu Umeda, Yu Kawahara, Yasuhiro Nakamura, Yukiko Kiniwa, Osamu Yamasaki, Satoshi Fukushima, Masahito Kawazu, Yutaka Suzuki, Hiroyoshi Nishikawa, Toyoyuki Hanazawa, Mizuo Ando, Takashi Inozume, Yosuke Togashi

    Cancer Research   84 ( 13 )   2109 - 2122   2024年4月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:American Association for Cancer Research (AACR)  

    Abstract

    T-cell exhaustion is a major contributor to immunosuppression in the tumor microenvironment (TME). Blockade of key regulators of T-cell exhaustion, such as programmed death 1, can reinvigorate tumor-specific T cells and activate antitumor immunity in various types of cancer. In this study, we identified that CD106 was specifically expressed in exhausted CD8+ T cells in the TME using single-cell RNA sequencing. High CD106 expression in the TME in clinical samples corresponded to improved response to cancer immunotherapy. CD106 in tumor-specific T cells suppressed antitumor immunity both in vitro and in vivo, and loss of CD106 in CD8+ T cells suppressed tumor growth and improved response to programmed death 1 blockade. Mechanistically, CD106 inhibited T-cell receptor (TCR) signaling by interacting with the TCR/CD3 complex and reducing its surface expression. Together, these findings provide insights into the immunosuppressive role of CD106 expressed in tumor-specific exhausted CD8+ T cells, identifying it as a potential biomarker and therapeutic target for cancer immunotherapy.

    Significance: CD106 is specifically expressed in tumor-specific exhausted CD8+ T cells and inhibits the TCR signaling pathway by reducing surface expression of the TCR/CD3 complex to suppress antitumor immunity.

    DOI: 10.1158/0008-5472.can-23-0453

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    その他リンク: https://aacrjournals.org/cancerres/article-pdf/84/13/2109/3469360/can-23-0453.pdf

  • Stem-like progenitor and terminally differentiated TFH-like CD4+ T cell exhaustion in the tumor microenvironment. 査読 国際誌

    Wenhao Zhou, Shusuke Kawashima, Takamasa Ishino, Katsushige Kawase, Youki Ueda, Kazuo Yamashita, Tomofumi Watanabe, Masahito Kawazu, Hiromichi Dansako, Yutaka Suzuki, Hiroyoshi Nishikawa, Takashi Inozume, Joji Nagasaki, Yosuke Togashi

    Cell reports   43 ( 2 )   113797 - 113797   2024年2月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Immune checkpoint inhibitors exert clinical efficacy against various types of cancer through reinvigoration of exhausted CD8+ T cells that attack cancer cells directly in the tumor microenvironment (TME). Using single-cell sequencing and mouse models, we show that CXCL13, highly expressed in tumor-infiltrating exhausted CD8+ T cells, induces CD4+ follicular helper T (TFH) cell infiltration, contributing to anti-tumor immunity. Furthermore, a part of the TFH cells in the TME exhibits cytotoxicity and directly attacks major histocompatibility complex-II-expressing tumors. TFH-like cytotoxic CD4+ T cells have high LAG-3/BLIMP1 and low TCF1 expression without self-renewal ability, whereas non-cytotoxic TFH cells express low LAG-3/BLIMP1 and high TCF1 with self-renewal ability, closely resembling the relationship between terminally differentiated and stem-like progenitor exhaustion in CD8+ T cells, respectively. Our findings provide deep insights into TFH-like CD4+ T cell exhaustion with helper progenitor and cytotoxic differentiated functions, mediating anti-tumor immunity orchestrally with CD8+ T cells.

    DOI: 10.1016/j.celrep.2024.113797

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  • Low frequency of intracranial progression in advanced NSCLC patients treated with cancer immunotherapies 査読

    Naoya Kemmotsu, Kiichiro Ninomiya, Kei Kunimasa, Takamasa Ishino, Joji Nagasaki, Yoshihiro Otani, Hiroyuki Michiue, Eiki Ichihara, Kadoaki Ohashi, Takako Inoue, Motohiro Tamiya, Kazuko Sakai, Youki Ueda, Hiromichi Dansako, Kazuto Nishio, Katsuyuki Kiura, Isao Date, Yosuke Togashi

    International Journal of Cancer   154 ( 1 )   169 - 179   2023年8月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Wiley  

    Abstract

    Intracranial metastases are common in nonsmall‐cell lung cancer (NSCLC) patients, whose prognosis is very poor. In addition, intracranial progression is common during systemic treatments due to the inability to penetrate central nervous system (CNS) barriers, whereas the intracranial effects of cancer immunotherapies remain unclear. We analyzed clinical data to evaluate the frequency of intracranial progression in advanced NSCLC patients treated with PD‐1 blockade therapies compared with those treated without PD‐1 blockade therapies, and found that the frequency of intracranial progression in advanced NSCLC patients treated with PD‐1 blockade therapies was significantly lower than that in patients treated with cytotoxic chemotherapies. In murine models, intracranial rechallenged tumors after initial rejection by PD‐1 blockade were suppressed. Accordingly, long‐lived memory precursor effector T cells and antigen‐specific T cells were increased by PD‐1 blockade in intracranial lesions. However, intracranial rechallenged different tumors are not suppressed. Our results indicate that cancer immunotherapies can prevent intracranial progression, maintaining long‐term effects intracranially as well as systemically. If intracranial recurrence occurs during the treatment with PD‐1 blockade therapies, aggressive local therapies could be worthwhile.

    DOI: 10.1002/ijc.34700

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    その他リンク: https://onlinelibrary.wiley.com/doi/pdf/10.1002/ijc.34700

  • Combination therapy with hydrogen peroxide and irradiation promotes an abscopal effect in mouse models. 査読 国際誌

    Naoya Kemmotsu, Li Zhu, Joji Nagasaki, Yoshihiro Otani, Youki Ueda, Hiromichi Dansako, Yue Fang, Isao Date, Yosuke Togashi

    Cancer science   114 ( 10 )   3848 - 3856   2023年7月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Hydrogen peroxide (H2 O2 ) induces oxidative stress and cytotoxicity, and can be used for treating cancers in combination with radiotherapy. A product comprising H2 O2 and sodium hyaluronate has been developed as a radiosensitizer. However, the effects of H2 O2 on antitumor immunity remain unclear. To investigate the effects of H2 O2 , especially the abscopal effect when combined with radiotherapy (RT), we implanted murine tumor cells simultaneously in two locations in mouse models: the hind limb and back. H2 O2 mixed with sodium hyaluronate was injected intratumorally, followed by irradiation only at the hind limb lesion. No treatment was administered to the back lesion. The H2 O2 /RT combination significantly reduced tumor growth at the noninjected/nonirradiated site in the back lesion, whereas H2 O2 or RT individually did not reduce tumor growth. Flow cytometric analyses of the tumor-draining lymph nodes in the injected/irradiated areas showed that the number of dendritic cells increased significantly with maturation in the H2 O2 /RT combination group. In addition, analyses of tumor-infiltrating lymphocytes showed that the number of CD8+ (cluster of differentiation 8) T cells and the frequency of IFN-γ+ (interferon gamma) CD8+ T cells were higher in the noninjected/nonirradiated tumors in the H2 O2 /RT group compared to those in the other groups. PD-1 (programmed death receptor 1) blockade further increased the antitumor effect against noninjected/nonirradiated tumors in the H2 O2 /RT group. Intratumoral injection of H2 O2 combined with RT therefore induces an abscopal effect by activating antitumor immunity, which can be further enhanced by PD-1 blockade. These findings promote the development of H2 O2 /RT therapy combined with cancer immunotherapies, even for advanced cancers.

    DOI: 10.1111/cas.15911

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  • Activated CTLA-4-independent immunosuppression of Treg cells disturbs CTLA-4 blockade-mediated antitumor immunity. 査読 国際誌

    Tomofumi Watanabe, Takamasa Ishino, Youki Ueda, Joji Nagasaki, Takuya Sadahira, Hiromichi Dansako, Motoo Araki, Yosuke Togashi

    Cancer science   114 ( 5 )   1859 - 1870   2023年2月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Combination therapy with anti-cytotoxic T lymphocyte-associated protein 4 (CTLA-4) and anti-programmed death-1 (PD-1) monoclonal antibodies (mAbs) has dramatically improved the prognosis of patients with multiple types of cancer, including renal cell carcinoma (RCC). However, more than half of RCC patients fail to respond to this therapy. Regulatory T cells (Treg cells) are a subset of highly immunosuppressive CD4+ T cells that promote the immune escape of tumors by suppressing effector T cells in the tumor microenvironment (TME) through various mechanisms. CTLA-4 is constitutively expressed in Treg cells and is regarded as a key molecule for Treg cell-mediated immunosuppressive functions, suppressing antigen-presenting cells by binding to CD80/CD86. Reducing Treg cells in the TME with an anti-CTLA-4 mAb with antibody-dependent cellular cytotoxicity (ADCC) activity is considered an essential mechanism to achieve tumor regression. In contrast, we demonstrated that only CTLA-4 blockade without ADCC activity enhanced CD28 costimulatory signaling pathways in Treg cells and promoted Treg-cell proliferation in mouse models. CTLA-4 blockade also augmented CTLA-4-independent immunosuppressive functions, including cytokine production, leading to insufficient antitumor effects. Similar results were also observed in human peripheral blood lymphocytes and tumor-infiltrating lymphocytes from patients with RCC. Our findings highlight the importance of Treg-cell depletion to achieve tumor regression in response to CTLA-4 blockade therapies.

    DOI: 10.1111/cas.15756

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  • Somatic mutations can induce a noninflamed tumour microenvironment via their original gene functions, despite deriving neoantigens 査読

    Takamasa Ishino, Shusuke Kawashima, Etsuko Tanji, Toshihide Ueno, Youki Ueda, Sadahisa Ogasawara, Kazuhito Sato, Hiroyuki Mano, Soichiro Ishihara, Naoya Kato, Masahito Kawazu, Yosuke Togashi

    British Journal of Cancer   128 ( 6 )   1166 - 1175   2023年2月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Springer Science and Business Media LLC  

    Abstract

    Background

    Identifying biomarkers to predict immune checkpoint inhibitor (ICI) efficacy is warranted. Considering that somatic mutation-derived neoantigens induce strong immune responses, patients with a high tumour mutational burden reportedly tend to respond to ICIs. However, there are several conflicting data. Therefore, we focused on the original function of neoantigenic mutations and their impact on the tumour microenvironment (TME).

    Methods

    We evaluated 88 high-frequency microsatellite instability (MSI-H) colorectal cancers and analysed the function of the identified neoantigenic mutations and their influence on programmed cell death 1 (PD-1) blockade efficacy. The results were validated using The Cancer Genome Atlas (TCGA) datasets.

    Results

    We identified frameshift mutations in RNF43 as a common neoantigenic gene mutation in MSI-H tumours. However, loss-of-function RNF43 mutations induced noninflamed TME by activating the WNT/β-catenin signalling pathway. In addition, loss of RNF43 function induced resistance to PD-1 blockade even in neoantigen-rich tumours. TCGA dataset analyses demonstrated that passenger rather than driver gene mutations were related to the inflamed TME in diverse cancer types.

    Conclusions

    We propose a novel concept of “paradoxical neoantigenic mutations” that can induce noninflamed TME through their original gene functions, despite deriving neoantigens, suggesting the significance of qualities as well as quantities in neoantigenic mutations.

    DOI: 10.1038/s41416-023-02165-6

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    その他リンク: https://www.nature.com/articles/s41416-023-02165-6

  • Mixed response to cancer immunotherapy is driven by intratumor heterogeneity and differential inter-lesion immune infiltration 査読

    Takao Morinaga, Takashi Inozume, Masahito Kawazu, Youki Ueda, Nicolas Sax, Kazuo Yamashita, Shusuke Kawashima, Joji Nagasaki, Toshihide Ueno, Jason Lin, Yuuki Ohara, Takeshi Kuwata, Hiroki Yukami, Akihito Kawazoe, Kohei Shitara, Akiko Honobe-Tabuchi, Takehiro Ohnuma, Tatsuyoshi Kawamura, Yoshiyasu Umeda, Yu Kawahara, Yasuhiro Nakamura, Yukiko Kiniwa, Ayako Morita, Eiki Ichihara, Katsuyuki Kiura, Tomohiro Enokida, Makoto Tahara, Yoshinori Hasegawa, Hiroyuki Mano, Yutaka Suzuki, Hiroyoshi Nishikawa, Yosuke Togashi

    Cancer Research Communications   2 ( 7 )   739 - 753   2022年7月

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    掲載種別:研究論文(学術雑誌)   出版者・発行元:American Association for Cancer Research (AACR)  

    Abstract

    Some patients experience mixed response to immunotherapy, whose biological mechanisms and clinical impact have been obscure. We obtained two tumor samples from lymph node (LN) metastatic lesions in a same patient. Whole exome sequencing for the both tumors and single-cell sequencing for the both tumor-infiltrating lymphocytes (TILs) demonstrated a significant difference in tumor clonality and TILs’ characteristics, especially exhausted T cell clonotypes, although a close relationship between the tumor cell and T cell clones were observed as a response of an overlapped exhausted T cell clone to an overlapped neoantigen. To mimic the clinical setting, we generated a mouse model of several clones from a same tumor cell line. Similarly, differential tumor clones harbored distinct TILs, and one responded to PD-1 blockade but the other did not in this model. We further conducted cohort study (n = 503) treated with PD-1 blockade monotherapies to investigate the outcome of mixed response. Patients with mixed responses to PD-1 blockade had a poor prognosis in our cohort. Particularly, there were significant differences in both tumor and T cell clones between the primary and LN lesions in a patient who experienced tumor response to anti-PD-1 mAb followed by disease progression in only LN metastasis. Our results underscore that intertumoral heterogeneity alters characteristics of TILs even in the same patient, leading to mixed response to immunotherapy and significant difference in the outcome.

    DOI: 10.1158/2767-9764.crc-22-0050

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  • Extracellular vesicles activate ATM‐Chk2 signaling pathway through the intercellular transfer of mitochondrial DNA in HBV‐infected human hepatocytes 査読

    Hiromichi Dansako, Youki Ueda, Shinya Satoh, Nobuyuki Kato

    The FASEB Journal   35 ( 6 )   2021年6月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Wiley  

    DOI: 10.1096/fj.202002678r

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    その他リンク: https://onlinelibrary.wiley.com/doi/full-xml/10.1096/fj.202002678R

  • Antiviral mechanism of preclinical antimalarial compounds possessing multiple antiviral activities. 査読 国際誌

    Weilin Gu, Youki Ueda, Hiromichi Dansako, Shinya Satoh, Nobuyuki Kato

    FASEB bioAdvances   3 ( 5 )   356 - 373   2021年5月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    We previously found that N-89 and its derivative, N-251, which are being developed as antimalarial compounds, showed multiple antiviral activities including hepatitis C virus (HCV). In this study, we focused on the most characterized anti-HCV activity of N-89(N-251) to clarify their antiviral mechanisms. We first prepared cells exhibiting resistance to N-89(N-251) than the parental cells by serial treatment of HCV-RNA-replicating parental cells with N-89(N-251). Then, we newly generated HCV-RNA-replicating cells with the replacement of HCV-RNAs derived from N-89(N-251)-resistant cells and parental cells. Using these cells, we examined the degree of inhibition of HCV-RNA replication by N-89(N-251) and found that the host and viral factors contributed almost equally to the resistance to N-89(N-251). To further examine the contribution of the host factors, we selected several candidate genes by cDNA microarray analysis and found that the upregulated expression of at least RAC2 and CKMT1B genes independently and differently contributed to the acquisition of an N-89(N-251)-resistant phenotype. For the viral factors, we selected several mutation candidates by the genetic comparative analysis of HCV-RNAs and showed that at least one M414I mutation in the HCV NS5B contributed to the resistance to N-89. Moreover, we demonstrated that the combination of host factors (RAC2 and/or CKMT1B) and a viral factor (M414I mutation) additively increased the resistance to N-89. In summary, we identified the host and viral factors contributing to the acquisition of N-89(N-251)-resistance in HCV-RNA replication. These findings will be useful for clarification of the antiviral mechanism of N-89(N-251).

    DOI: 10.1096/fba.2020-00107

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  • Identification of ribavirin-responsive cis-elements for GPAM suppression in the GPAM genome. 査読 国際誌

    Daichi Onomura, Shinya Satoh, Youki Ueda, Hiromichi Dansako, Nobuyuki Kato

    Biochemical and biophysical research communications   533 ( 1 )   148 - 154   2020年11月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Glycerol-3-phosphate acyltransferase, mitochondrial (GPAM) is a rate-limiting enzyme catalyzing triglyceride synthesis. Recently, we demonstrated that the anti-viral drug ribavirin (RBV) reduces GPAM expression by downregulating CCAAT/enhancer-binding protein α (C/EBPα). However, the precise mechanisms of GPAM suppression have remained unclear. Here, we found that RBV suppressed GPAM expression by downregulating not only C/EBPα, but also sterol regulatory element-binding protein-1c (SREBP-1c). We also found that cis-elements regulated by C/EBPα and SREBP-1c functioned as distal and proximal enhancers, respectively, to express hepatocyte- and adipocytes-specific GPAM variants. These results imply that RBV disrupts formation of the enhancer machineries on the GPAM genome by downregulating both transcription factors. Our findings may contribute to the development of treatments for fatty liver diseases caused by aberrant triglyceride synthesis.

    DOI: 10.1016/j.bbrc.2020.08.112

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  • Study of multiple genetic variations caused by persistent hepatitis C virus replication in long-term cell culture. 査読 国際誌

    Nobuyuki Kato, Youki Ueda, Hiroe Sejima, Weilin Gu, Shinya Satoh, Hiromichi Dansako, Masanori Ikeda, Kunitada Shimotohno

    Archives of virology   165 ( 2 )   331 - 343   2020年2月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The most characteristic feature of the hepatitis C virus (HCV) genome in patients with chronic hepatitis C is its remarkable variability and diversity. To better understand this feature, we performed genetic analysis of HCV replicons recovered from two human hepatoma HuH-7-derived cell lines after 1, 3, 5, 7, and 9 years in culture: The cell lines 50-1 and sO harbored HCV 1B-1 and O strain-derived HCV replicons established in 2002 and 2003, respectively. The results revealed that genetic variations in both replicons accumulated in a time-dependent manner at a constant rate despite the maintenance of moderate diversity (less than 1.8% difference) between the clones and that the mutation rate in the 50-1 and sO replicons was 2.5 and 2.9 × 10-3 base substitutions/site/year, respectively. We found that the genetic distance of both replicons increased from 7.9% to 10.5% after 9 years in culture. In addition, we observed that the guanine + cytosine (GC) content of both replicon RNAs increased in a time-dependent manner, as observed in our previous studies. Finally, we demonstrated that the high sensitivity of both replicons to direct-acting antivirals was maintained even after 9 years in culture. Our results suggest that long-term cultured HCV replicon-harboring cells are a useful model for understanding the variability and diversity of the HCV genome and the drug sensitivity of HCV in patients with chronic hepatitis C.

    DOI: 10.1007/s00705-019-04461-0

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  • A new hepatoma cell line exhibiting high susceptibility to hepatitis B virus infection. 査読 国際誌

    Youki Ueda, Weilin Gu, Hiromichi Dansako, Hironori Nishitsuji, Shinya Satoh, Kunitada Shimotohno, Nobuyuki Kato

    Biochemical and biophysical research communications   515 ( 1 )   156 - 162   2019年7月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Hepatitis B virus (HBV) infection, which increases the risk of cirrhosis and hepatocellular carcinoma and requires lifelong treatment, has become a major global health problem. However, host factors essential to the HBV life cycle are still unclear, and the development of new drugs is needed. Cells derived from the human hepatoma cell line HepG2 and engineered to overexpress sodium taurocholate cotransporting polypeptide (NTCP: a receptor for HBV), termed HepG2/NTCP cells, are widely used as the cell-based HBV infection and replication systems for HBV research. We recently found that human hepatoma cell line Li23-derived cells overexpressing NTCP (A8 cells subcloned from Li23 cells), whose gene expression profile was distinct from that of HepG2/NTCP cells, were also sensitive to HBV infection. However, the HBV susceptibility of A8 cells was around 1/100 that of HepG2/NTCP cells. Since we considered that plural cell assay systems will be needed for the objective evaluation of anti-HBV reagents, as we previously demonstrated in hepatitis C virus research, we here attempted to develop a new Li23 cell-derived assay system equivalent to that using HepG2/NTCP cells. By repeated subcloning of A8 cells, we successfully established a new cell line (A8.15.78.10) exhibiting high HBV susceptibility equal to that of HepG2/NTCP cells. Characterization of A8.15.78.10 cells revealed that the increase of HBV susceptibility was correlated with increases in the protein and glycosylation levels of NTCP, and with decreased expression of STING, a factor contributing to innate immunity. Finally, we performed a comparative evaluation of HBV entry inhibitors (cyclosporin A and rosiglitazone) by an HBV/secNL reporter assay using A8.15.78.10 cells or HepG2/NTCP cells. The results confirmed that cyclosporin A exhibited anti-HBV activity in both cell lines, as previously reported. However, we found that rosiglitazone did not show the anti-HBV activity in A8.15.78.10 cells, although it worked in HepG2/NTCP cells as previously reported. This suggested that the difference in anti-HBV activity between cyclosporin A and rosiglitazone was due to the different types of cells used for the assay. In conclusion, plural assay systems using different types of cells are required for the objective and impartial evaluation of anti-HBV reagents.

    DOI: 10.1016/j.bbrc.2019.05.126

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  • High-level expression of STING restricts susceptibility to HBV by mediating type III IFN induction. 査読 国際誌

    Hiromichi Dansako, Hirotaka Imai, Youki Ueda, Shinya Satoh, Kunitada Shimotohno, Nobuyuki Kato

    FASEB bioAdvances   1 ( 2 )   67 - 80   2019年2月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Hepatitis B virus (HBV) is a hepatotropic DNA virus causing hepatic diseases such as chronic hepatitis, liver cirrhosis, and hepatocellular carcinoma. To study HBV, human hepatoma HepG2 cells are currently used as an HBV infectious cell culture model worldwide. HepG2 cells exhibit susceptibility to HBV by exogenously expressing sodium taurocholate cotransporting polypeptide (NTCP). We herein demonstrated that human immortalized hepatocyte NKNT-3 cells exhibited susceptibility to HBV by exogenously expressing NTCP (NKNT-3/NTCP cells). By comparing cyclic GMP-AMP synthetase (cGAS)-stimulator of interferon genes (STING) signaling pathway in several NKNT-3/NTCP cell-derived cell clones, we found that STING was highly expressed in cell clones exhibiting resistance but not susceptibility to HBV. High-level expression of STING was implicated in HBV-triggered induction of type III IFN and a pro-inflammatory cytokine, IL-6. In contrast, RNAi-mediated knockdown of STING inhibited type III IFN induction and restored the levels of HBV total transcript in an HBV-infected cell clone exhibiting resistance to HBV. These results suggest that STING regulates susceptibility to HBV by its expression levels. STING may thus be a novel target for anti-HBV strategies.

    DOI: 10.1096/fba.1022

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    その他リンク: http://orcid.org/0000-0002-2627-8524

  • Ribavirin-induced down-regulation of CCAAT/enhancer-binding protein α leads to suppression of lipogenesis. 査読

    Satoh S, Onomura D, Ueda Y, Dansako H, Honda M, Kaneko S, Kato N

    The Biochemical journal   476 ( 1 )   137 - 149   2019年1月

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    掲載種別:研究論文(学術雑誌)  

    DOI: 10.1042/BCJ20180680

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  • Daunorubicin, a topoisomerase II poison, suppresses viral production of hepatitis B virus by inducing cGAS-dependent innate immune response. 査読 国際誌

    Imai H, Dansako H, Ueda Y, Satoh S, Kato N

    Biochemical and biophysical research communications   504 ( 4 )   672 - 678   2018年10月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1016/j.bbrc.2018.08.195

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  • Multiple antiviral activities of the antimalarial and anti-hepatitis C drug candidates N-89 and N-251. 査読 国際誌

    Youki Ueda, Weilin Gu, Hiromichi Dansako, Hye-Sook Kim, Sayaka Yoshizaki, Nobuaki Okumura, Tomohiro Ishikawa, Hironori Nishitsuji, Fumihiro Kato, Takayuki Hishiki, Shinya Satoh, Koji Ishii, Michiaki Masuda, Kunitada Shimotohno, Masanori Ikeda, Nobuyuki Kato

    Biochemistry and biophysics reports   15   1 - 6   2018年9月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The chemically synthesized endoperoxide compound N-89 and its derivative N-251 were shown to have potent antimalarial activity. We previously demonstrated that N-89 and N-251 potently inhibited the RNA replication of hepatitis C virus (HCV), which belongs to the Flaviviridae family. Since antimalarial and anti-HCV mechanisms have not been clarified, we were interested whether N-89 and N-251 possessed the activity against viruses other than HCV. In this study, we examined the effects of N-89 and N-251 on other flaviviruses (dengue virus and Japanese encephalitis virus) and hepatitis viruses (hepatitis B virus and hepatitis E virus). Our findings revealed that N-89 and N-251 moderately inhibited the RNA replication of Japanese encephalitis virus and hepatitis E virus, although we could not detect those anti-dengue virus activities. We also observed that N-89 and N-251 moderately inhibited the replication of hepatitis B virus at the step after viral translation. These results suggest the possibility that N-89 and N-251 act on some common host factor(s) that are necessary for viral replications, rather than the possibility that N-89 and N-251 directly act on the viral proteins except for HCV. We describe a new type of antiviral reagents, N-89 and N-251, which are applicable to multiple different viruses.

    DOI: 10.1016/j.bbrep.2018.05.007

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  • ULBP1 is induced by hepatitis C virus infection and is the target of the NK cell-mediated innate immune response in human hepatocytes 査読

    Hiromichi Dansako, Hirotaka Imai, Youki Ueda, Shinya Satoh, Takaji Wakita, Nobuyuki Kato

    FEBS Open Bio   8 ( 3 )   361 - 371   2018年3月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Wiley Blackwell  

    Natural killer (NK) cells through their NK group 2 member D (NKG2D) receptors recognize NKG2D ligands such as UL16-binding proteins (ULBPs) on virus-infected cells and subsequently trigger the host innate immune response. In the present study, we demonstrated that hepatitis C virus (HCV) induced the cell surface expression of ULBP1 in human immortalized hepatocyte PH5CH8 cells and human hepatoma HuH-7 cell-derived RSc cells. Interestingly, NK cell line NK-92 induced cytotoxicity and interferon-γ mRNA expression and subsequently reduced the levels of HCV RNA replication during co-culture with HCV-infected RSc cells. From these results, we conclude that ULBP1 is a target of the NK cell-mediated innate immune response in HCV-infected human hepatocytes.

    DOI: 10.1002/2211-5463.12373

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  • Ribavirin suppresses hepatic lipogenesis through inosine monophosphate dehydrogenase inhibition: involvement of adenosine monophosphate-activated protein kinase-related kinases and retinoid X receptor α. 査読

    Satoh S, Mori K, Onomura D, Ueda Y, Dansako H, Honda M, Kaneko S, Ikeda M, Kato N

    Hepatology Communications   1 ( 6 )   550 - 563   2017年8月

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    掲載種別:研究論文(学術雑誌)  

    DOI: 10.1002/hep4.1065

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  • Evaluation of preclinical antimalarial drugs, which can overcome direct acting antivirals-resistant hepatitis C viruses, using the viral reporter assay systems 査読

    Youki Ueda, Hiromichi Dansako, Shinya Satoh, Hye-Sook Kim, Yusuke Wataya, Hiroyuki Doi, Masanori Ikeda, Nobuyuki Kato

    VIRUS RESEARCH   235   37 - 48   2017年5月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:ELSEVIER SCIENCE BV  

    Persistent hepatitis C virus (HCV) infection causes chronic liver diseases and is a major global health problem. Recently developed treatments with direct-acting antivirals (DAAs) have largely improved the sustained virologic response rate of patients with chronic hepatitis C. However, this approach is still hindered by its great expense and the problem of drug resistance. Using our cell-based HCV assay systems, we reported that the preclinical antimalarial drugs N-89 and N-251 exhibited potent anti-HCV activities. In this study we used our assay systems to evaluate the anti-HCV activities of six kinds of DAAs individually or in combination with N-89 or N-251. The results showed that the DAAs had potent anti-HCV activities and N-89 or N-251 contributed additive or synergistic effect. Using DAA-resistant HCV-RNA-replicating cells, which were prepared by continuous treatment with each DAA, we demonstrated that N-89 and N-251 could overcome all of the DAA-resistant HCVs. These preclinical drugs would have been potential as components of a therapeutic regimen that also included combinations of various DAAs. In addition, sequence analysis of the NS3-NS5B regions of the DAA-resistant HCV genomes newly found several amino acid (aa) substitutions that were suggested to contribute to DAA-resistance in addition to the aa substitutions already known to cause DAA-resistance. Among these new aa substitutions, we found that two substitutions in the NS3 region (D79G and S174Y) contributed to simeprevirand/or asunaprevir-resistance.

    DOI: 10.1016/j.virusres.2017.03.015

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  • The cyclic GMP-AMP synthetase-STING signaling pathway is required for both the innate immune response against HBV and the suppression of HBV assembly

    Hiromichi Dansako, Youki Ueda, Nobuaki Okumura, Shinya Satoh, Masaya Sugiyama, Masashi Mizokami, Masanori Ikeda, Nobuyuki Kato

    FEBS JOURNAL   283 ( 1 )   144 - 156   2016年1月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:WILEY-BLACKWELL  

    During viral replication, the innate immune response is induced through the recognition of viral replication intermediates by host factor(s). One of these host factors, cyclic GMP-AMP synthetase (cGAS), was recently reported to be involved in the recognition of viral DNA derived from DNA viruses. However, it is uncertain whether cGAS is involved in the recognition of hepatitis B virus (HBV), which is a hepatotropic DNA virus. In the present study, we demonstrated that HBV genome-derived double-stranded DNA induced the innate immune response through cGAS and its adaptor protein, stimulator of interferon genes (STING), in human hepatoma Li23 cells expressing high levels of cGAS. In addition, we demonstrated that HBV infection induced ISG56 through the cGAS-STING signaling pathway. This signaling pathway also showed an antiviral response towards HBV through the suppression of viral assembly. From these results, we conclude that the cGAS-STING signaling pathway is required for not only the innate immune response against HBV but also the suppression of HBV assembly. The cGAS-STING signaling pathway may thus be a novel target for anti-HBV strategies.

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  • Synthesis and in vitro activity of pyrrolo[3,4-d]pyrimidine-2,5-diones as potential non-nucleoside HCV inhibitors 査読

    Amany S. Mostafa, Serry A. El Bialy, Waleed A. Bayoumi, Youki Ueda, Masanori Ikeda, Nobuyuki Kato, Ali M. Abdelal

    Current Enzyme Inhibition   12 ( 2 )   170 - 176   2016年

  • Establishment of Hepatitis C Virus RNA-Replicating Cell Lines Possessing Ribavirin-Resistant Phenotype

    Shinya Satoh, Kyoko Mori, Youki Ueda, Hiroe Sejima, Hiromichi Dansako, Masanori Ikeda, Nobuyuki Kato

    PLOS ONE   10 ( 2 )   e0118313   2015年2月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:PUBLIC LIBRARY SCIENCE  

    Background
    Ribavirin (RBV) is a potential partner of interferon-based therapy and recently approved therapy using direct acting antivirals for patients with chronic hepatitis C. However, the precise mechanisms underlying RBV action against hepatitis C virus (HCV) replication are not yet understood. To clarify this point, we attempted to develop RBV-resistant cells from RBV-sensitive HCV RNA-replicating cells.
    Methodology/Principal Findings
    By repetitive RBV (100 mu M) treatment (10 weeks) of 3.5-year-cultured OL8 cells, in which genome-length HCV RNA (O strain of genotype 1b) efficiently replicates, dozens of colonies that survived RBV treatment were obtained. These colonies were mixed together and further treated with high doses of RBV (up to 200 mu M). By such RBV treatment, we successfully established 12 RBV-survived genome-length HCV RNA-replicating cell lines. Among them, three representative cell lines were characterized. HCV RNA replication in these cells resisted RBV significantly more than that in the parental OL8 cells. Genetic analysis of HCV found several common and conserved amino acid substitutions in HCV proteins among the three RBV-resistant cell species. Furthermore, using cDNA microarray and quantitative RT-PCR analyses, we identified 5 host genes whose expression levels were commonly altered by more than four-fold among these RBV-resistant cells compared with the parental cells. Moreover, to determine whether viral or host factor contributes to RBV resistance, we developed newly HCV RNA-replicating cells by introducing total RNAs isolated from RBV-sensitive parental cells or RBV-resistant cells into the HCV RNA-cured-parental or -RBV-resistant cells using an electroporation method, and evaluated the degrees of RBV resistance of these developed cells. Consequently, we found that RBV-resistant phenotype was conferred mainly by host factor and partially by viral factor.
    Conclusions/Significance
    These newly established HCV RNA-replicating cell lines should become useful tools for further understanding the anti-HCV mechanisms of RBV.

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  • Synthesis of 3 ',4 '-difluoro-3 '-deoxyribonucleosides and its evaluation of the biological activities: Discovery of a novel type of anti-HCV agent 3 ',4 '-difluorocordycepin 査読

    Hisashi Shimada, Kazuhiro Haraguchi, Kumi Hotta, Tomoko Miyaike, Yasuyuki Kitagawa, Hiromichi Tanaka, Ryutaro Kaneda, Hiroshi Abe, Satoshi Shuto, Kyoko Mori, Youki Ueda, Nobuyuki Kato, Robert Snoeck, Graciela Andrei, Jan Balzarini

    BIOORGANIC & MEDICINAL CHEMISTRY   22 ( 21 )   6174 - 6182   2014年11月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:PERGAMON-ELSEVIER SCIENCE LTD  

    Upon reacting 3',4'-unsaturated cytosine (8 and 9) and adenine nucleosides (13 and 14) with XeF2/BF3 center dot OEt2, the respective novel 3',4'-difluoro-3'-deoxyribofuranosyl nucleosides (10-12 and 15-18) could be obtained. Formation of anti-adducts (11, 16 and 18) revealed that the fluorination involved oxonium ions as incipient intermediates. TBDMS-protected 3',4'-unsaturated adenosine provided the beta-face adducts as sole stereoisomers whereas a-face-selectivity was observed with the TBDPS-protected adenosine 14. The evaluation of the novel 3'-deoxy-3',4'-difluororibofuranosylcytosine-(19-21) and adenine nucleosides (22-25) against antitumor and antiviral activities revealed that 3',4'-difluorocordycepin (24) was found to possess anti-HCV activity. The SI of 24 was comparable to that of the anti-HCV drug ribavirin. However, sofosbuvir, FDA-approved novel anti-HCV drug, showed better SI value. Our finding revealed that the introduction of the fluoro-substituent into the 4'-position of cordycepin derivatives decreased the cytotoxicity to the host cell with retention of the antiviral activity. (C) 2014 Elsevier Ltd. All rights reserved.

    DOI: 10.1016/j.bmc.2014.08.024

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  • Synthesis and inhibitory activity on hepatitis C virus RNA replication of 4-(1,1,1,3,3,3-hexafluoro-2-hydroxy-2-propyl)aniline analogs 査読

    Kenji Matsuno, Youki Ueda, Miwa Fukuda, Kenji Onoda, Minoru Waki, Masanori Ikeda, Nobuyuki Kato, Hiroyuki Miyachi

    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS   24 ( 17 )   4276 - 4280   2014年9月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:PERGAMON-ELSEVIER SCIENCE LTD  

    Using our recently developed assay system for full-genome-length hepatitis C virus (HCV) RNA replication in human hepatoma-derived Li23 cells (ORL8), we identified 4-(1,1,1,3,3,3-hexafluoro-2-hydroxy-2-propyl)aniline analog la as a novel HCV inhibitor. Structural modifications of la provided a series of sulfonamides 7 with much more potent HCV RNA replication-inhibitory activity than ribavirin. Compound 7a showed an additive anti-HCV effect in combination with standard anti-HCV therapy (IFN-alpha plus ribavirin). Since 7a generated reactive oxygen species (ROS) in the ORL8 system and its anti-HCV activity was blocked by vitamin E, its anti-HCV activity may be mediated at least in part by ROS. (C) 2014 Elsevier Ltd. All rights reserved.

    DOI: 10.1016/j.bmcl.2014.07.019

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  • Anti-HCV activity of the Chinese medicinal fungus Cordyceps militaris 査読

    Youki Ueda, Kyoko Mori, Shinya Satoh, Hiromichi Dansako, Masanori Ikeda, Nobuyuki Kato

    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS   447 ( 2 )   341 - 345   2014年5月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:ACADEMIC PRESS INC ELSEVIER SCIENCE  

    Persistent hepatitis C virus (HCV) infection causes chronic liver diseases and is a global health problem. Although the sustained virologic response rate in the treatment of genotype 1 using new triple therapy (pegylated-interferon, ribavirin, and telaprevir/boceprevir) has been improved by more than 70%, several severe side effects such as skin rash/ageusia and advanced anemia have become a problem. Under these circumstances, a new type of anti-HCV oral drug with few side effects is needed. Our recently developed HCV drug assay systems, including the HuH-7 cell line-derived OR6 and AH1R, and the Li23 cell line derived ORL8 and ORL11, allow genome-length HCV RNAs (several strains of genotype 1b) encoding renilla luciferase to replicate efficiently. Using these systems as anti-HCV candidates, we have identified numerous existing medicines that can be used against HCV with few side effects, such as statins and teprenon. To obtain additional anti-HCV candidates, we evaluated a number of oral health supplements, and found that the capsule but not the liquid form of Cordyceps militaris (CM) (Ascomycotinanorth, North Chinese caterpillar fungus), which is used as a Chinese herbal medicine, exhibited moderate anti-HCV activity. In combination with interferon-a or ribavirin, CM exhibited an additive inhibitory effect. Among the main components of CM, cordycepin, but not ergosterol, contributed to the anti-HCV activity of CM. In consideration of all these results, we suggest that CM would be useful as an oral anti-HCV agent in combination with interferon-alpha and/or ribavirin. (C) 2014 Elsevier Inc. All rights reserved.

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  • Genetic Characterization of Hepatitis C Virus in Long-Term RNA Replication Using Li23 Cell Culture Systems 査読

    Nobuyuki Kato, Hiroe Sejima, Youki Ueda, Kyoko Mori, Shinya Satoh, Hiromichi Dansako, Masanori Ikeda

    PLOS ONE   9 ( 3 )   91156 - 91156   2014年3月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:PUBLIC LIBRARY SCIENCE  

    Background: The most distinguishing genetic feature of hepatitis C virus (HCV) is its remarkable diversity and variation. To understand this feature, we previously performed genetic analysis of HCV in the long-term culture of human hepatoma HuH-7-derived HCV RNA-replicating cell lines. On the other hand, we newly established HCV RNA-replicating cell lines using human hepatoma Li23 cells, which were distinct from HuH-7 cells.
    Methodology/Principal Findings: Li23-derived HCV RNA-replicating cells were cultured for 4 years. We performed genetic analysis of HCVs recovered from these cells at 0, 2, and 4 years in culture. Most analysis was performed in two separate parts: one part covered from the 5'-terminus to NS2, which is mostly nonessential for RNA replication, and the other part covered from NS3 to NS5B, which is essential for RNA replication. Genetic mutations in both regions accumulated in a timedependent manner, and the mutation rates in the 5'-terminus-NS2 and NS3-NS5B regions were 4.0-9.0x10(-3) and 2.7-4.0x10(-3) base substitutions/site/year, respectively. These results suggest that the variation in the NS3-NS5B regions is affected by the pressure of RNA replication. Several in-frame deletions (3-105 nucleotides) were detected in the structural regions of HCV RNAs obtained from 2-year or 4-year cultured cells. Phylogenetic tree analyses clearly showed that the genetic diversity of HCV was expanded in a time-dependent manner. The GC content of HCV RNA was significantly increased in a time-dependent manner, as previously observed in HuH-7-derived cell systems. This phenomenon was partially due to the alterations in codon usages for codon optimization in human cells. Furthermore, we demonstrated that these long-term cultured cells were useful as a source for the selection of HCV clones showing resistance to anti-HCV agents.
    Conclusions/Significance: Long-term cultured HCV RNA-replicating cells are useful for the analysis of evolutionary dynamics and variations of HCV and for drug-resistance analysis.

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  • Peroxisome proliferator-activated receptor delta antagonists inhibit hepatitis C virus RNA replication 査読

    Shintaro Ban, Youki Ueda, Masao Ohashi, Kenji Matsuno, Masanori Ikeda, Nobuyuki Kato, Hiroyuki Miyachi

    Bioorganic and Medicinal Chemistry Letters   23 ( 17 )   4774 - 4778   2013年9月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    It has been reported that ligand-mediated transcription factor peroxisome proliferator-activated receptor alpha (hPPARα) is involved in hepatitis C virus (HCV) RNA replication, whereas hPPARγ is not, and the effect of hPPARδ is unknown. Here, we show that hPPARδ-selective antagonists effectively inhibit HCV RNA replication. We describe the design, synthesis and pharmacological evaluation of a series of biphenyl-4-carboxylic acid-type hPPARδ antagonists, including previously reported compounds, as candidate anti-HCV agents. A representative compound (4c) dose-dependently inhibited HCV RNA replication (EC50 0.22 μM), while exhibiting relatively weak cytotoxicity to the host cells (CC50 2.5 μM). It also showed an additive and dose-dependent effect on the inhibition of HCV RNA replication by pegylated interferon alpha (Peg-IFNα) alone and by both Peg-IFNα and ribavirin (currently the clinical treatment of choice for HCV infection). Thus, combination of a hPPARδ antagonist with current therapy may improve the efficacy of treatment for HCV infection. © 2013 Elsevier Ltd. All rights reserved.

    DOI: 10.1016/j.bmcl.2013.07.005

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  • New Preclinical Antimalarial Drugs Potently Inhibit Hepatitis C Virus Genotype 1b RNA Replication 査読

    Youki Ueda, Midori Takeda, Kyoko Mori, Hiromichi Dansako, Takaji Wakita, Hye-Sook Kim, Akira Sato, Yusuke Wataya, Masanori Ikeda, Nobuyuki Kato

    PLOS ONE   8 ( 8 )   e72519   2013年8月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:PUBLIC LIBRARY SCIENCE  

    Background: Persistent hepatitis C virus (HCV) infection causes chronic liver diseases and is a global health problem. Although new triple therapy (pegylated-interferon, ribavirin, and telaprevir/boceprevir) has recently been started and is expected to achieve a sustained virologic response of more than 70% in HCV genotype 1 patients, there are several problems to be resolved, including skin rash/ageusia and advanced anemia. Thus a new type of anti-HCV drug is still needed.
    Methodology/Principal Findings: Recently developed HCV drug assay systems using HCV-RNA-replicating cells (e.g., HuH-7-derived OR6 and Li23-derived ORL8) were used to evaluate the anti-HCV activity of drug candidates. During the course of the evaluation of anti-HCV candidates, we unexpectedly found that two preclinical antimalarial drugs (N-89 and its derivative N-251) showed potent anti-HCV activities at tens of nanomolar concentrations irrespective of the cell lines and HCV strains of genotype 1b. We confirmed that replication of authentic HCV-RNA was inhibited by these drugs. Interestingly, however, this anti-HCV activity did not work for JFH-1 strain of genotype 2a. We demonstrated that HCV-RNA-replicating cells were cured by treatment with only N-89. A comparative time course assay using N-89 and interferon-alpha demonstrated that N-89-treated ORL8 cells had more rapid anti-HCV kinetics than did interferon-alpha-treated cells. This anti-HCV activity was largely canceled by vitamin E. In combination with interferon-alpha and/or ribavirin, N-89 or N-251 exhibited a synergistic inhibitory effect.
    Conclusions/Significance: We found that the preclinical antimalarial drugs N-89 and N-251 exhibited very fast and potent anti-HCV activities using cell-based HCV-RNA-replication assay systems. N-89 and N-251 may be useful as a new type of anti-HCV reagents when used singly or in combination with interferon and/or ribavirin.

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  • Development of a drug assay system with hepatitis C virus genome derived from a patient with acute hepatitis C 査読

    Kyoko Mori, Youki Ueda, Yasuo Ariumi, Hiromichi Dansako, Masanori Ikeda, Nobuyuki Kato

    VIRUS GENES   44 ( 3 )   374 - 381   2012年6月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:SPRINGER  

    We developed a new cell culture drug assay system (AH1R), in which genome-length hepatitis C virus (HCV) RNA (AH1 strain of genotype 1b derived from a patient with acute hepatitis C) efficiently replicates. By comparing the AH1R system with the OR6 assay system that we developed previously (O strain of genotype 1b derived from an HCV-positive blood donor), we demonstrated that the anti-HCV profiles of reagents including interferon-gamma and cyclosporine A significantly differed between these assay systems. Furthermore, we found unexpectedly that rolipram, an anti-inflammatory drug, showed anti-HCV activity in the AH1R assay but not in the OR6 assay, suggesting that the anti-HCV activity of rolipram differs depending on the HCV strain. Taken together, these results suggest that the AH1R assay system is useful for the objective evaluation of anti-HCV reagents and for the discovery of different classes of anti-HCV reagents.

    DOI: 10.1007/s11262-012-0712-2

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  • Plural assay systems derived from different cell lines and hepatitis C virus strains are required for the objective evaluation of anti-hepatitis C virus reagents 査読

    Youki Ueda, Kyoko Mori, Yasuo Ariumi, Masanori Ikeda, Nobuyuki Kato

    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS   409 ( 4 )   663 - 668   2011年6月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:ACADEMIC PRESS INC ELSEVIER SCIENCE  

    Persistent hepatitis C virus (HCV) infection causes chronic liver diseases and is a global health problem. HuH-7 hepatoma-derived cells are widely used as the only cell-based HCV replication system for HCV research, including drug assays. Recently, using different hepatoma Li23-derived cells, we developed an HCV drug assay system (ORL8), in which the genome-length HCV RNA (O strain of genotype 1b) encoding renilla luciferase replicates efficiently. In this study, using the HuH-7-derived OR6 assay system that we developed previously and the ORL8 assay system, we evaluated 26 anti-HCV reagents, which other groups had reported as anti-HCV candidates using HuH-7-derived assay systems other than ORB. The results revealed that more than half of the reagents showed different anti-HCV activities from those in the previous studies, and that anti-HCV activities evaluated by the ORB and ORL8 assays were also frequently different. In further evaluation using the HuH-7-derived AH1R assay system, which was developed using the AH1 strain of genotype 1b, several reagents showed different anti-HCV activities in comparison with those evaluated by the OR6 and ORL8 assays. These results suggest that the different activities of anti-HCV reagents are caused by the differences in cell lines or HCV strains used for the development of assay systems. Therefore, we conclude that plural HCV assay systems developed using different cell lines or HCV strains are required for the objective evaluation of anti-HCV reagents. (C) 2011 Elsevier Inc. All rights reserved.

    DOI: 10.1016/j.bbrc.2011.05.061

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  • Mechanism of freezing of water in contact with mesoporous silicas MCM-41, SBA-15 and SBA-16: role of boundary water of pore outlets in freezing 査読

    Shigeharu Kittaka, Yuki Ueda, Fumika Fujisaki, Taku Iiyama, Toshio Yamaguchi

    PHYSICAL CHEMISTRY CHEMICAL PHYSICS   13 ( 38 )   17222 - 17233   2011年

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:ROYAL SOC CHEMISTRY  

    The freezing mechanism of water contacted with mesoporous silicas with uniform pore shapes, both cylindrical and cagelike, was studied by thermodynamic and structural analyses with differential scanning calorimetry (DSC) and X-ray diffraction (XRD) together with adsorption measurements. In the DSC data extra exothermic peaks were found at around 230 K for water confined in SBA-15, in addition to that due to the freezing of pore water. These peaks are most likely to be ascribed to the freezing of water present over the micropore and/or mesopore outlets of coronas in SBA-15. Freezing of water confined in SBA-16 was systematically analysed by DSC with changing the pore size. The freezing temperature was found to be around 232 K, close to the homogeneous nucleation temperature of bulk water, independent of the pore size when the pore diameter (d) < 7.0 nm. Water confined in the cagelike pores of SBA-16 is probably surrounded by a water layer (boundary water) at the outlets of channels to interconnect the pores and of fine corona-like pores, which is similar to that present at the outlet of cylindrical pores in MCM-41 and of cylindrical channels in SBA-15. The presence of the boundary water would be a key for water in SBA-16 to freeze at the homogeneous nucleation temperature. This phenomenon is similar to those well known for water droplets in oil and water droplets of clouds in the sky. The XRD data showed that the cubic ice I(c) was formed in SBA-16 as previously found in SBA-15 when d < 8.0 nm.

    DOI: 10.1039/c1cp21458f

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書籍等出版物

  • 【遺伝統計学の新潮流-新規創薬・個別化医療への挑戦】遺伝統計学とシングルセル解析 がん領域におけるシングルセル解析

    上田 優輝, 冨樫 庸介

    医歯薬出版(株)  2024年3月 

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    記述言語:日本語

    がんに対する治療法として最近注目されているがん免疫療法は,多数のがん種で有効性が示されている一方で,治療効果予測の難しさなどさまざまな課題が存在し,効果予測バイオマーカーやより有効性の高い新規治療法の開発が望まれている.この治療法は腫瘍微小環境におけるT細胞の活性化が重要であるが,腫瘍微小環境にはがん細胞やT細胞だけでなく多様な細胞種が存在し,相互作用などさまざまな因子が複雑に関与しており,バルクでの解析だけでは不十分である.この問題を解決するために,シングルセル解析はここ数年で急速に発展し,DNA,RNA,タンパク質,代謝物などのシングルセルレベルでの解析が可能になってきた.また,病理検体を用いて組織の位置情報を保持したまま解析が可能な技術も登場するなど,腫瘍微小環境の詳細に迫れるようになってきた.それらの解析手法を組み合わせることによって,新たな知見が明らかになってきている.(著者抄録)

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  • 【マルチオミクス データ駆動時代の疾患研究 がん、老化、生活習慣病 最新のオミクス統合で挑む標的探索と病態解明】(第3章)各分野におけるマルチオミクス研究 マルチオミクス解析による腫瘍微小環境の解明

    上田 優輝, 冨樫 庸介

    (株)羊土社  2023年9月  ( ISBN:9784758104135

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    記述言語:日本語

    がん免疫療法は多数のがん種で有効性が示される一方,治療効果予測の難しさなどさまざまな課題がある.この治療法は腫瘍微小環境内におけるT細胞の活性化が重要であるが,対峙する腫瘍細胞の変化や他の構成細胞(B細胞や樹状細胞など)との相互作用などさまざまな因子が複雑にかかわり合っている.バルクでのゲノミクス解析,プロテオミクス解析,メタボロミクス解析に加えて,ここ数年の技術革新によりシングルセルレベルでRNA・タンパク質などの発現やDNAのメチル化,代謝産物など幅広い観点から解析可能になっただけでなく,病理検体を用いて位置情報を保持したままそれらの解析ができるようになるなど,マルチオミクス解析により腫瘍微小環境の詳細に迫れるようになってきた.それらの手法を組合わせることによって,新たな知見が明らかになってきている.(著者抄録)

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  • マルチオミクス解析による腫瘍微小環境の解明

    上田優輝, 冨樫庸介( 担当: 共著)

    実験医学  2023年 

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  • 【がん免疫療法研究の進歩】免疫チェックポイント阻害薬によるがん免疫応答の制御 シングルセル解析を用いた腫瘍微小環境の解明

    上田 優輝, 冨樫 庸介

    (有)科学評論社  2022年2月 

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    記述言語:日本語

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  • 腫瘍微小環境におけるクローン進展

    上田優輝、冨樫庸介( 担当: 共著)

    癌と化学療法  2022年 

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    記述言語:日本語

  • シングセル解析を用いた腫瘍微小環境の解明

    上田優輝、冨樫庸介( 担当: 共著)

    腫瘍内科  2022年 

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    記述言語:日本語

  • シングセル解析を用いた腫瘍微小環境の解明

    上田優輝, 冨樫庸介( 担当: 共著)

    腫瘍内科  2022年 

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  • 腫瘍微小環境におけるクローン進展

    上田優輝, 冨樫庸介( 担当: 共著)

    癌と化学療法  2022年 

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講演・口頭発表等

  • Abstract 7536: CD4+T cell exhaustion in the tumor microenvironment and antitumor immunity

    Joji Nagasaki, Wenhao Zhou, Shusuke Kawashima, Takamasa Ishino, Katsushige Kawase, Youki Ueda, Kazuo Yamashita, Tomofumi Watanabe, Takashi Inozume, Yosuke Togashi

    Cancer Research  2024年3月22日  American Association for Cancer Research (AACR)

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    開催年月日: 2024年3月22日

    Abstract

    Background: Immune checkpoint inhibitors (ICIs) exert clinical efficacy against various types of cancer through reinvigoration of exhausted CD8+ T cells that attack cancer cells directly in the tumor microenvironment (TME). However, compared to CD8+ T cell exhaustion, the role of CD4+ T cell exhaustion in antitumor immunity remains unclear.

    Methods and Results: From single-cell sequencing for tumor-infiltrating lymphocytes (TILs) from patients with melanoma and mouse models, we found that CXCL13, which is highly expressed in tumor-infiltrating exhausted CD8+ T cells, induces PD-1+CXCR5+CD4+ follicular helper T (TFH)-like cell infiltration, which could contribute to antitumor immunity. Furthermore, a part of the TFH-like cells in the TME exhibits cytotoxicity and directly attacks MHC-II-expressing tumors. RNA velocity and latent time analysis in single-cell sequencing for melanoma TILs showed that the differentiation of TFH-like cells from the naive CD4+ T cells were different from that of other CD4+ T cells. In addition, the TFH-like cytotoxic CD4+ T cells were at the late stage of differentiation and some non-cytotoxic TFH-like cells might differentiate into TFH-like cytotoxic CD4+ T cells. We additionally found considerable overlapped clonotypes between the cytotoxic and non-cytotoxic clusters. TFH-like cytotoxic CD4+ T cells have high LAG-3/BLIMP1 and low TCF1 expression without self-renewal ability, whereas non-cytotoxic TFH-like cells express low LAG-3/BLIMP1 and high TCF1 with self-renewal ability, closely resembling the relationship between terminally differentiated and stem-like progenitor exhaustion in CD8+ T cells, respectively.

    Conclusion: Our findings provide novel insights into TFH-like CD4+ T cell exhaustion with helper progenitor and cytotoxic differentiated functions, which mediates antitumor immunity orchestrally with CD8+ T cells.

    Citation Format: Joji Nagasaki, Wenhao Zhou, Shusuke Kawashima, Takamasa Ishino, Katsushige Kawase, Youki Ueda, Kazuo Yamashita, Tomofumi Watanabe, Takashi Inozume, Yosuke Togashi. CD4+T cell exhaustion in the tumor microenvironment and antitumor immunity [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2024; Part 1 (Regular Abstracts); 2024 Apr 5-10; San Diego, CA. Philadelphia (PA): AACR; Cancer Res 2024;84(6_Suppl):Abstract nr 7536.

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  • Treg細胞の活性化CTLA-4非依存性免疫抑制によるCTLA-4遮断の不安定な抗腫瘍効果(Disturbed anti-tumor effect of CTLA-4 blockade by activated CTLA-4-independent immunosuppression of Treg cells)

    渡部 智文, 石野 貴雅, 上田 優輝, 長崎 譲慈, 河田 達志, 定平 卓也, 岩田 健宏, 片山 聡, 枝村 康平, 小林 泰之, 團迫 浩方, 荒木 元朗, 冨樫 庸介

    西日本泌尿器科学会総会抄録集  2023年11月  (一社)西日本泌尿器科学会

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    開催年月日: 2023年11月

    記述言語:英語  

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  • Treg細胞の活性化CTLA-4非依存性免疫抑制によるCTLA-4遮断の不安定な抗腫瘍効果(Disturbed anti-tumor effect of CTLA-4 blockade by activated CTLA-4-independent immunosuppression of Treg cells)

    渡部 智文, 石野 貴雅, 上田 優輝, 長崎 譲慈, 河田 達志, 定平 卓也, 岩田 健宏, 片山 聡, 枝村 康平, 小林 泰之, 團迫 浩方, 荒木 元朗, 冨樫 庸介

    西日本泌尿器科学会総会抄録集  2023年11月  (一社)西日本泌尿器科学会

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    開催年月日: 2023年11月

    記述言語:英語  

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  • CTLA-4の単純な阻害はTreg細胞のCTLA-4以外の免疫抑制機構の活性化を引き起こす(Anti-tumor effects of CTLA-4 blockade are distrubed by activated CTLA-4-independent immunosuppression of Treg cells)

    渡部 智文, 石野 貴雅, 上田 優輝, 長崎 譲慈, 丸山 雄樹, 河田 達志, 定平 卓也, 岩田 健宏, 片山 聡, 西村 慎吾, 枝村 康平, 小林 知子, 小林 泰之, 團迫 浩方, 荒木 元朗, 冨樫 庸介

    日本癌学会総会記事  2023年9月  (一社)日本癌学会

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    開催年月日: 2023年9月

    記述言語:英語  

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  • CTLA-4の単純な阻害はTreg細胞のCTLA-4以外の免疫抑制機構の活性化を引き起こす(Anti-tumor effects of CTLA-4 blockade are distrubed by activated CTLA-4-independent immunosuppression of Treg cells)

    渡部 智文, 石野 貴雅, 上田 優輝, 長崎 譲慈, 丸山 雄樹, 河田 達志, 定平 卓也, 岩田 健宏, 片山 聡, 西村 慎吾, 枝村 康平, 小林 知子, 小林 泰之, 團迫 浩方, 荒木 元朗, 冨樫 庸介

    日本癌学会総会記事  2023年9月  (一社)日本癌学会

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    開催年月日: 2023年9月

    記述言語:英語  

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  • CTLA-4の単純な阻害はTreg細胞のCTLA-4以外の免疫抑制機構の活性化を引き起こす

    渡部智文, 石野貴雅, 石野貴雅, 上田優輝, 長崎譲慈, 長崎譲慈, 丸山雄樹, 河田達志, 定平卓也, 岩田健宏, 片山聡, 西村慎吾, 枝村康平, 小林知子, 小林泰之, 團迫浩方, 荒木元朗, 冨樫庸介

    日本癌学会学術総会抄録集(Web)  2023年 

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    開催年月日: 2023年

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  • Neoantigen paradox; neoantigens do not always induce an inflamed tumor microenvironment 招待

    Takamasa Ishino, Shusuke Kawashima, Etsuko Tanji, Toshihide Ueno, Youki Ueda, Sadahisa Ogasawara, Kazuhito Sato, Hiroyuki Mano, Soichiro Ishihara, Naoya Kato, Masahito Kawazu, Yosuke Togashi

    2022年12月10日 

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    開催年月日: 2022年12月10日 - 2022年12月14日

    記述言語:英語  

  • Paradoxical neoantigens; neoantigenic mutations can paradoxically induce a noninflamed tumor microenvironment via their original functions

    Takamasa Ishino, Toshihide Ueno, Youki Ueda, Hiroyuki Mano, Soichiro Ishihara, Naoya Kato, Masahito Kawazu, Yosuke Togashi

    2022年9月29日 

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    開催年月日: 2022年9月29日 - 2022年10月1日

    記述言語:英語  

  • その機能がnon-inflamedな腫瘍微小環境を誘導し得る逆説的なネオ抗原の存在

    石野 貴雅, 上野 敏秀, 上田 優輝, 間野 博行, 石原 聡一郎, 加藤 直也, 河津 正人, 冨樫 庸介

    第81回日本癌学会総会  2022年9月29日 

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    開催年月日: 2022年9月29日 - 2022年10月1日

    記述言語:英語   会議種別:口頭発表(一般)  

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  • その機能がnon-inflamedな腫瘍微小環境を誘導し得る逆説的なネオ抗原の存在(Paradoxical neoantigens; neoantigens can paradoxically induce a non-inflamed tumor microenvironment via gene functions.)

    石野 貴雅, 上野 敏秀, 上田 優輝, 間野 博行, 石原 聡一郎, 加藤 直也, 河津 正人, 冨樫 庸介

    日本癌学会総会記事  2022年9月  (一社)日本癌学会

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    開催年月日: 2022年9月

    記述言語:英語  

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  • 転写因子C/EBPαを標的にした中性脂肪合成阻害剤の探索

    佐藤伸哉, 小野村大地, 渡士幸一, 上田優輝, 團迫浩方, 本多政夫, 金子周一, 鈴木哲朗, 加藤宣之

    第21回日本分子生物学会年会  2021年12月1日 

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    開催年月日: 2021年12月1日 - 2021年12月3日

    記述言語:日本語   会議種別:ポスター発表  

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  • 抗マラリア薬として開発中の化合物に見出された強力な抗HCV活性(Potent anti-HCV activities found in preclinical anti-malarial drugs)

    上田 優輝, 森 京子, 団迫 浩方, 金 惠淑, 綿矢 有佑, 池田 正徳, 加藤 宣之

    日本癌学会総会記事  2012年8月  (一社)日本癌学会

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    開催年月日: 2012年8月

    記述言語:英語  

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  • 抗HCV剤の活性評価には複数の細胞株由来のHCVアッセイ系が必要である

    上田 優輝, 森 京子, 池田 正徳, 有海 康雄, 加藤 宣之

    肝臓  2011年4月  (一社)日本肝臓学会

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    開催年月日: 2011年4月

    記述言語:日本語  

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  • 抗HCV薬リバビリンによるGPAM発現抑制機序の解明

    第33回中国四国ウイルス研究会  2018年 

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  • 抗HCV薬リバビリンによる中性脂質合成抑制機序の解明

    第33回中国四国ウイルス研究会  2018年 

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  • HCV以外の広範なウイルスにも有効性を示した抗マラリア薬候補N-89とN-251

    第33回中国四国ウイルス研究会  2018年 

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  • 抗マラリア及び抗HCV薬候補N-89とN-251が有する幅広い抗ウイルス活性

    第28回抗ウイルス療法学会学術集会・総会  2018年 

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  • 抗HCV薬として開発中のN-89とN-251に対する抵抗性の獲得に寄与する宿主側とウイルス側因子の解析

    第33回中国四国ウイルス研究会  2018年 

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  • ヒト不死化肝NKNT-3細胞におけるtopoisomerase II阻害剤によるcGAS依存的な自然免疫応答の誘導

    第33回中国四国ウイルス研究会  2018年 

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  • ヒト不死化肝NKNT-3細胞におけるB型肝炎ウイルスの感染増殖性を制御する宿主因子の探索

    第33回中国四国ウイルス研究会  2018年 

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  • Downregulation of C/EBPα by anti-HCV drug ribavirin leads to the suppression of triglyceride synthesis pathway.

    The 65th Annual Meeting of The Japanese Society for Virology  2017年 

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  • Development of HBV infection system using human immortalized hepatocyte NKNT-3 cells.

    The 65th Annual Meeting of The Japanese Society for Virology  2017年 

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  • Screening of FDA-approved drugs activating cyclic GMP-AMP synthase promoter.

    The 65th Annual Meeting of The Japanese Society for Virology  2017年 

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  • Resistant acquistion mechanism for anti-HCV drug candidates, N-89 and its derivative N-251.

    The 65th Annual Meeting of The Japanese Society for Virology  2017年 

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  • Identification of new amino acid substitusions contributing to DAA-resistance, using HCV reporter assay systems.

    The 65th Annual Meeting of The Japanese Society for Virology  2017年 

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  • HCVポリメラーゼ/プロテアーゼ二重阻害活性を有するフラーレン誘導体の細胞内HCV複製阻害及び酸化ストレス抑制効果

    日本薬学会第137年会  2017年 

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  • Development of human hepatoma cell line, Li23-derived cells possessing high susceptibility to HBV.

    The 2017 international HBV meeting  2017年 

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  • 抗HCV薬として開発中のN-89とN-251に対する抵抗性獲得機序の解析

    第32回中国四国ウイルス研究会  2017年 

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  • ヒトcGASの発現を亢進するインターフェロンγと新規薬剤の探索

    第32回中国四国ウイルス研究会  2017年 

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  • 抗HCV薬リバビリンの脂質生合成抑制機序の解明

    第32回中国四国ウイルス研究会  2017年 

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  • ヒト不死化肝細胞株を用いた新規HBV感染増殖システムの開発

    第32回中国四国ウイルス研究会  2017年 

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  • HCVレポーターアッセイ系を用いたDAAに抵抗性を示す新規アミノ酸置換の同定

    第32回中国四国ウイルス研究会  2017年 

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  • DAA製剤による新治療時代におけるN-89/N-251の有用性とそれらの作用機序の解析

    第4回肝炎ウイルス研修会  2016年 

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  • Mechanism for suppression of hepatic lipogenesis by anti-HCV drug ribavirin.

    The 64th Annual Meeting of The Japanese Society for Virology  2016年 

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  • The mechanism of natural killer cell-mediated recognition against hepatitis C virus in human immortalized hepatocyte cells.

    The 64th Annual Meeting of The Japanese Society for Virology  2016年 

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  • Both host and viral factors contribute to the resistance to preclinical anti-HCV drugs, N-89 and N-251.

    The 64th Annual Meeting of The Japanese Society for Virology, Sapporo  2016年 

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  • Genetic characterization of HCVs obtained from HCV-RNA-replicating cells possessing a DAA-, N-89-, or N-251-resistant phenotype.

    The 64th Annual Meeting of The Japanese Society for Virology  2016年 

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  • 全長HCV-RNA複製細胞におけるexosome産生量の増加

    第3回日本細胞外小胞学会及び第8回日本RNAi研究会  2016年 

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  • 核酸アナログ型抗HCV薬によるAMPK活性への影響

    第31回中国四国ウイルス研究会  2016年 

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  • B型肝炎ウイルスに対する感染受容性を有するヒト肝がんLi23細胞のサブクローニングとその有用性

    第31回中国四国ウイルス研究会  2016年 

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  • ヒト不死化肝細胞を用いたナチュラルキラー細胞によるC型肝炎ウイルス認識機構の解析

    第31回中国四国ウイルス研究会  2016年 

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  • 抗HCV薬候補として開発中のN-89とN-251に対する抵抗性の獲得には宿主とウイルス側両方が関与する

    第31回中国四国ウイルス研究会  2016年 

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  • N-89或いはN-251に耐性を示すHCV-RNA複製細胞から得られたHCV遺伝子の性状解析

    第31回中国四国ウイルス研究会  2016年 

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  • DAA製剤によるHCV治療におけるN-89/N-251の有用性とそれらの作用機序の解析

    第26回抗ウイルス療法学会  2016年 

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  • Improved ExoQuick protocol for the preparation of exosomes released from human hepatoma cells.

    The 63rd Annual Meeting of The Japanese Society for Virology  2015年 

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  • Function and transcriptional regulation mechanism of CPB2 gene downregulated by persistent HCV RNA replication.

    The 63rd Annual Meeting of The Japanese Society for Virology  2015年 

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  • New function of anti-HCV drug ribavirin: supprssive effect in hepatic lipogenesis.

    The 63rd Annual Meeting of The Japanese Society for Virology  2015年 

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  • The cGAS-STING signaling pathway is required for both the innate immune against HBV and suppression of HBV assembly.

    The 63rd Annual Meeting of The Japanese Society for Virology  2015年 

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  • Antimalarial preclinical drugs, N-89 and N-251, overcome various DAAs-resistant HCVs.

    The 63rd Annual Meeting of The Japanese Society for Virology  2015年 

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  • Antimalarial preclinical drugs, N-89 and N-251, overcome various DAAs-resistant HCVs.

    22nd International Symposium on Hepatitis C Virus and Related Viruses  2015年 

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  • HCV-RNAの長期複製により顕著な発現低下を示したCPB2遺伝子の機能解析と発現制御機構の解析

    第30回中国四国ウイルス研究会  2015年 

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  • HCVの細胞内複製を許容する肝がん細胞におけるエクソソーム調製法の確立

    第30回中国四国ウイルス研究会  2015年 

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  • cGAS-STINGシグナル経路はB型肝炎ウイルスの感染と会合を制御する

    第30回中国四国ウイルス研究会  2015年 

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  • 抗HCV薬リバビリンの脂質生合成系における新規機能解析

    第30回中国四国ウイルス研究会  2015年 

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  • 強い抗HCV活性が見出された抗マラリア化合物の臨床応用に向けた研究とDAAとの併用効果

    第30回中国四国ウイルス研究会  2015年 

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  • HCV RNAの複製や抗HCV活性に対するビタミンEによる制御機構

    第26回ビタミンE研究会  2015年 

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  • Antimalarial preclinical drugs, N-89 and N-251, overcome various DAAs-resistant HCVs.

    22nd International Symposium on Hepatitis C Virus and Related Viruses  2015年 

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  • Characterization of anti-HCV activity of N-251, a preclinical antimalarial drug, and its combination effect with DAA.

    21st International Symposium on Hepatitis C Virus and Related Viruses  2014年 

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  • C型肝炎治療薬を指向したPPARα/δデュアルアンタゴニストの創製

    第32回メディシナルケミストリーシンポジウム  2014年 

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  • ヘキサフルオロイソプロピルベンズアミド誘導体による抗C型肝炎ウィルス(HCV)活性

    第32回メディシナルケミストリーシンポジウム  2014年 

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  • 抗マラリア薬候補で強い抗HCV活性を示すN-251の臨床応用に向けた研究とDAAとの併用効果

    第62回日本ウイルス学会学術集会  2014年 

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  • 臨床応用に向けた抗マラリア薬候補N-251の抗HCV活性作用機序の解析

    第18回日本肝臓学会大会  2014年 

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  • Characterization of anti-HCV activity of N-251, a preclinical antimalarial drug, and its combination effect with DAA.

    21st International Symposium on Hepatitis C Virus and Related Viruses  2014年 

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  • 抗マラリア薬候補N-251の抗HCV活性作用機序の解析と臨床応用に向けた研究

    第29回中国四国ウイルス研究会  2014年 

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  • リバビリン耐性全長HCV-RNA複製細胞株の樹立と特性解析

    第29回中国四国ウイルス研究会  2014年 

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  • HCV RNA評価系により見出したN-251等の抗HCV化合物とその利用について

    第2回肝炎ウイルス研修会  2013年 

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  • リバビリン耐性全長HCV-RNA複製細胞株の樹立

    第61回日本ウイルス学会学術総会  2013年 

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  • 抗HCV活性を有する中国由来の漢方薬であるサナギタケ(北冬虫夏草)

    第61回日本ウイルス学会学術総会  2013年 

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  • Anti-HCV activity of Cordyceps militaris used as a chinese herbal medicine.

    20th International Symposium on Hepatitis C Virus and Related Viruses  2013年 

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  • 中国由来の漢方薬であるサナギタケ(北冬虫夏草)が有する抗HCV活性

    第28回中国四国ウイルス研究会  2013年 

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  • 中国由来の漢方薬であるサナギタケ(北冬虫夏草)に見出された抗HCV活性

    第49回日本肝臓学会総会  2013年 

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  • Anti-HCV activity of Cordyceps militaris used as a chinese herbal medicine.

    20th International Symposium on Hepatitis C Virus and Related Viruses  2013年 

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  • Plural assay systems derived from different cell lines and hepatitis C virus strains are required for the objective evaluation of anti-hepatitis C virus reagents.

    Ueda Y, Mori K, Ariumi Y, Ikeda M, Kato N

    Biochemical and Biophysical Research Communications  2011年 

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受賞

  • 第27回中国四国ウイルス研究会・優秀演題賞

    2011年6月   中国四国ウイルス研究会   強力な抗HCV活性が見出された抗マラリア薬として開発中の化合物

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    受賞国:日本国

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共同研究・競争的資金等の研究

  • MASLD関連肝細胞がんにおけるミトコンドリア異常の抗腫瘍免疫応答への影響の解明

    研究課題/領域番号:24K11153  2024年04月 - 2027年03月

    日本学術振興会  科学研究費助成事業  基盤研究(C)

    上田 優輝, 冨樫 庸介, 大塚 基之

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    配分額:4680000円 ( 直接経費:3600000円 、 間接経費:1080000円 )

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  • レポーターHBVを駆使したB型肝炎ウイルス増殖機構の解析と創薬ターゲットの探索・同定に資する研究

    研究課題/領域番号:22fk0310507h0001  2022年04月 - 2025年03月

    日本医療研究開発機構(AMED)  肝炎等克服実用化研究事業 

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    担当区分:研究分担者 

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  • HCVを基盤としたRNAウイルス変異動態の数理モデル化

    研究課題/領域番号:22K15472  2022年04月 - 2024年03月

    日本学術振興会  科学研究費助成事業  若手研究

    上田 優輝

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    配分額:4550000円 ( 直接経費:3500000円 、 間接経費:1050000円 )

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  • HBV高感受性ヒト肝細胞株の樹立とHBV増殖制御因子の解析

    研究課題/領域番号:18K15169  2018年04月 - 2020年03月

    日本学術振興会  科学研究費助成事業  若手研究

    上田 優輝

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    配分額:4160000円 ( 直接経費:3200000円 、 間接経費:960000円 )

    HBVの基礎研究では肝がん細胞株由来のHepG2/NTCP細胞株が世界的に汎用されている。我々はHepG2とは遺伝子プロファイルが大きく異なる肝がん細胞株由来のLi23/NTCP細胞にHBV感受性を新たに見出しいたが、その感受性はHepG2/NTCP細胞の1/100以下であった。今回の研究において、我々はLi23/NTCP細胞を限界希釈法によるサブクローニングを繰り返すことによってHepG2/NTCPと同等のHBV感受性を示すA8.15.78.10細胞の樹立に成功した。これらの細胞株を用いて、我々は抗HBV剤の正当な評価には異なるタイプの細胞株を用いたHBVアッセイ系が必要であることを示した。

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  • レポーターHBVを駆使したHBV複製解析および創薬研究

    研究課題/領域番号:21fk0310104h9905  2017年04月 - 2021年03月

    日本医療研究開発機構(AMED)  肝炎等克服実用化研究事業 , 感染症実用化研究事業 

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    担当区分:研究分担者 

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  • 肝炎ウイルスの長期複製による肝がん誘発機構に関する研究

    研究課題/領域番号:16H05196  2016年04月 - 2019年03月

    日本学術振興会  科学研究費助成事業  基盤研究(B)

    加藤 宣之, 金 惠淑, 佐藤 伸哉, 團迫 浩方, 上田 優輝, 瀬島 寛恵, 谷 煒琳, 小野村 大地, 平本 洸貴

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    配分額:17420000円 ( 直接経費:13400000円 、 間接経費:4020000円 )

    HBVやHCVの長期複製と発癌との関係を明らかにすることを目的として、以下に示す研究成果を得た。(1) HCV の長期複製により顕著に発現低下したCPB2遺伝子の発現制御にVCX2とAGR2が関わっていた。(2) ヒト不死化肝細胞株NKNT-3とヒト肝癌細胞株Li23由来でHBVに高感受性を示すサブクローン化細胞株の樹立に成功した。(3) HBV感染前後で有意な発現変動を示す数種類の遺伝子を同定した。(4) 培養細胞から産生されるexosomeを精製する方法並びにその定量法を開発した。HBV低感受性細胞から産生されるexosome量が、高感受性細胞由来の量より有意に高いことを明らかにした。

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  • C型肝炎ウイルスに対する新規標的の同定とそれに基づく新規薬剤の開発

    研究課題/領域番号:12J02962  2012年04月 - 2015年03月

    日本学術振興会  科学研究費助成事業  特別研究員奨励費

    上田 優輝

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    配分額:2700000円 ( 直接経費:2700000円 )

    申請者は研究実施計画に基づき主体的に実験を行い、以下に示すような研究成果を得た。
    (1)前年度までの研究で強力な抗HCV活性を発見したN-89とN-251について、既存の抗HCV剤や今後日本で認可される予定の薬との併用効果等について調べた。初めに、HCVを直接標的として作られたDAA 製剤を購入し、DAA単剤で既報と同じ抗HCV活性が認められるか調べた。その結果、全てのDAAについて既報と同等以上の抗HCV活性が認められた。次に、N-89やN-251との併用効果を調べた。その結果、全てのDAAについて相加効果以上であった。次に、DAA抵抗性細胞を作成した。この細胞についてN-89やN-251への感受性を調べた結果、全てのDAA抵抗性細胞について親の細胞と感受性は変わらず、N-89やN-251とDAAの作用機序が違う事が示唆された。
    (2)前年度の研究でJ111, IDPO88およびIDPO66に強い抗HCV活性を見出した。今年度は抗HCV活性の作用機序を調べるため、J111とIDPO66の耐性細胞株の作成した。また、抗HCV活性を見出した化合物の構造を元に作製した誘導体の抗HCV活性の評価も行った結果、半数以上の化合物に抗HCV活性が認められた。
    以上の研究成果は、国内・国際学会において発表し、(1)の成果については学術雑誌に投稿予定である。
    今回の研究において、抗マラリア薬として開発されたN-89とN-251に強い抗HCV活性を示すことを見出し、臨床試験に向けた研究も大幅に進んだ。作用機序については完全に解明できなかったものの、今後の継続した研究によって、解明できる可能性を多いに残している。また、N-89やN-251だけでなく、PPARδアンタゴニストやLXRアンタゴニストにも抗HCV活性を見出し、多数の論文を発表した。このことから、研究課題に沿った成果が十分に挙げられたのではないかと考えられる。

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担当授業科目

  • 医学生物学 (2024年度) 特別  - その他

  • 生命の不思議2 (2024年度) 第3学期  - 火1~2

  • 腫瘍ウイルス学I(演習・実習) (2020年度) 特別  - その他

  • 腫瘍ウイルス学I(講義・演習) (2020年度) 特別  - その他

  • 腫瘍ウイルス学II(演習・実習) (2020年度) 特別  - その他

  • 腫瘍ウイルス学II(講義・演習) (2020年度) 特別  - その他

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